KEGG   PATHWAY: senj00970
Entry
senj00970                   Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Salmonella enterica subsp. enterica serovar Javiana
Class
Genetic Information Processing; Translation
Pathway map
senj00970  Aminoacyl-tRNA biosynthesis
senj00970

Organism
Salmonella enterica subsp. enterica serovar Javiana [GN:senj]
Gene
CFSAN001992t22484  tRNA-Ala [KO:K14218]
CFSAN001992t22486  tRNA-Ala [KO:K14218]
CFSAN001992t22390  tRNA-Ala [KO:K14218]
CFSAN001992t22424  tRNA-Ala [KO:K14218]
CFSAN001992t22420  tRNA-Ala [KO:K14218]
CFSAN001992t22434  tRNA-Arg [KO:K14219]
CFSAN001992t22466  tRNA-Arg [KO:K14219]
CFSAN001992t22468  tRNA-Arg [KO:K14219]
CFSAN001992t22472  tRNA-Arg [KO:K14219]
CFSAN001992t22470  tRNA-Arg [KO:K14219]
CFSAN001992t22348  tRNA-Arg [KO:K14219]
CFSAN001992t22350  tRNA-Arg [KO:K14219]
CFSAN001992t22382  tRNA-Arg [KO:K14219]
CFSAN001992t22488  tRNA-Arg [KO:K14219]
CFSAN001992t22324  tRNA-Asn [KO:K14220]
CFSAN001992t22326  tRNA-Asn [KO:K14220]
CFSAN001992t22328  tRNA-Asn [KO:K14220]
CFSAN001992t22330  tRNA-Asn [KO:K14220]
CFSAN001992t22386  tRNA-Asp [KO:K14221]
CFSAN001992t22388  tRNA-Asp [KO:K14221]
CFSAN001992t22438  tRNA-Asp [KO:K14221]
CFSAN001992t22336  tRNA-Cys [KO:K14222]
CFSAN001992t22378  tRNA-Gln [KO:K14223]
CFSAN001992t22380  tRNA-Gln [KO:K14223]
CFSAN001992t22372  tRNA-Gln [KO:K14223]
CFSAN001992t22374  tRNA-Gln [KO:K14223]
CFSAN001992t22410  tRNA-Glu [KO:K14224]
CFSAN001992t22440  tRNA-Glu [KO:K14224]
CFSAN001992t22446  tRNA-Glu [KO:K14224]
CFSAN001992t22474  tRNA-Glu [KO:K14224]
CFSAN001992t22414  tRNA-Gly [KO:K14225]
CFSAN001992t22458  tRNA-Gly [KO:K14225]
CFSAN001992t22334  tRNA-Gly [KO:K14225]
CFSAN001992t22404  tRNA-Gly [KO:K14225]
CFSAN001992t22406  tRNA-Gly [KO:K14225]
CFSAN001992t22402  tRNA-Gly [KO:K14225]
CFSAN001992t22432  tRNA-His [KO:K14226]
CFSAN001992t22392  tRNA-Ile [KO:K14227]
CFSAN001992t22422  tRNA-Ile [KO:K14227]
CFSAN001992t22426  tRNA-Ile [KO:K14227]
CFSAN001992t22394  tRNA-Leu [KO:K14228]
CFSAN001992t22430  tRNA-Leu [KO:K14228]
CFSAN001992t22398  tRNA-Leu [KO:K14228]
CFSAN001992t22396  tRNA-Leu [KO:K14228]
CFSAN001992t22400  tRNA-Leu [KO:K14228]
CFSAN001992t22338  tRNA-Leu [KO:K14228]
CFSAN001992t22450  tRNA-Leu [KO:K14228]
CFSAN001992t22370  tRNA-Leu [KO:K14228]
CFSAN001992t22358  tRNA-Lys [KO:K14229]
CFSAN001992t22366  tRNA-Lys [KO:K14229]
CFSAN001992t22360  tRNA-Lys [KO:K14229]
CFSAN001992t22476  tRNA-Lys [KO:K14229]
CFSAN001992t22362  tRNA-Lys [KO:K14229]
CFSAN001992t22368  tRNA-Met [KO:K14230]
CFSAN001992t22376  tRNA-Met [KO:K14230]
CFSAN001992t22454  tRNA-Met [KO:K14230]
CFSAN001992t22452  tRNA-Met [KO:K14230]
CFSAN001992t22460  tRNA-Met [KO:K14230]
CFSAN001992t22462  tRNA-Met [KO:K14230]
CFSAN001992t22408  tRNA-Phe [KO:K14231]
CFSAN001992t22456  tRNA-Phe [KO:K14231]
CFSAN001992t22322  tRNA-Pro [KO:K14232]
CFSAN001992t22444  tRNA-Pro [KO:K14232]
CFSAN001992t22428  tRNA-Pro [KO:K14232]
CFSAN001992t22352  tRNA-Ser [KO:K14233]
CFSAN001992t22356  tRNA-Ser [KO:K14233]
CFSAN001992t22332  tRNA-Ser [KO:K14233]
CFSAN001992t22354  tRNA-Ser [KO:K14233]
CFSAN001992t22464  tRNA-Ser [KO:K14233]
CFSAN001992t22418  tRNA-Thr [KO:K14234]
CFSAN001992t22412  tRNA-Thr [KO:K14234]
CFSAN001992t22384  tRNA-Thr [KO:K14234]
CFSAN001992t22448  tRNA-Thr [KO:K14234]
CFSAN001992t22436  tRNA-Trp [KO:K14235]
CFSAN001992t22416  tRNA-Tyr [KO:K14236]
CFSAN001992t22342  tRNA-Tyr [KO:K14236]
CFSAN001992t22340  tRNA-Tyr [KO:K14236]
CFSAN001992t22346  tRNA-Val [KO:K14237]
CFSAN001992t22364  tRNA-Val [KO:K14237]
CFSAN001992t22478  tRNA-Val [KO:K14237]
CFSAN001992t22482  tRNA-Val [KO:K14237]
CFSAN001992t22480  tRNA-Val [KO:K14237]
CFSAN001992t22344  tRNA-Val [KO:K14237]
CFSAN001992t22442  tRNA-Sec [KO:K14238]
CFSAN001992_21485  gltX; glutamyl-tRNA ligase [KO:K01885] [EC:6.1.1.17]
CFSAN001992_07965  glutaminyl-tRNA ligase [KO:K01886] [EC:6.1.1.18]
CFSAN001992_19405  alaS; alanyl-tRNA ligase [KO:K01872] [EC:6.1.1.7]
CFSAN001992_01925  aspS; aspartyl-tRNA ligase [KO:K01876] [EC:6.1.1.12]
CFSAN001992_06655  asnC; asparaginyl-tRNA ligase [KO:K01893] [EC:6.1.1.22]
CFSAN001992_15365  glyQ; glycyl-tRNA ligase subunit alpha [KO:K01878] [EC:6.1.1.14]
CFSAN001992_15370  glyS; glycyl-tRNA ligase subunit beta [KO:K01879] [EC:6.1.1.14]
CFSAN001992_04935  thrS; threonyl-tRNA ligase [KO:K01868] [EC:6.1.1.3]
CFSAN001992_06835  seryl-tRNA ligase [KO:K01875] [EC:6.1.1.11]
CFSAN001992_11740  hypothetical protein [KO:K01042] [EC:2.9.1.1]
CFSAN001992_15225  selenocysteine synthase [KO:K01042] [EC:2.9.1.1]
CFSAN001992_08600  cysS; cysteinyl-tRNA ligase [KO:K01883] [EC:6.1.1.16]
CFSAN001992_00590  metG; methionyl-tRNA ligase [KO:K01874] [EC:6.1.1.10]
CFSAN001992_16540  fmt; methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
CFSAN001992_11590  valS; valyl-tRNA ligase [KO:K01873] [EC:6.1.1.9]
CFSAN001992_08085  leuS; leucyl-tRNA ligase [KO:K01869] [EC:6.1.1.4]
CFSAN001992_10800  ileS; isoleucyl-tRNA ligase [KO:K01870] [EC:6.1.1.5]
CFSAN001992_18375  lysS; lysyl-tRNA ligase [KO:K04567] [EC:6.1.1.6]
CFSAN001992_01885  argS; arginyl-tRNA ligase [KO:K01887] [EC:6.1.1.19]
CFSAN001992_09765  prolyl-tRNA ligase [KO:K01881] [EC:6.1.1.15]
CFSAN001992_20940  hisS; histidyl-tRNA ligase [KO:K01892] [EC:6.1.1.21]
CFSAN001992_04915  pheS; phenylalanyl-tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
CFSAN001992_04910  pheT; phenylalanyl-tRNA ligase subunit beta [KO:K01890] [EC:6.1.1.20]
CFSAN001992_04345  tyrosyl-tRNA ligase [KO:K01866] [EC:6.1.1.1]
CFSAN001992_11420  tryptophanyl-tRNA ligase II [KO:K01867] [EC:6.1.1.2]
CFSAN001992_16175  tryptophanyl-tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
senj00250  Alanine, aspartate and glutamate metabolism
senj00260  Glycine, serine and threonine metabolism
senj00270  Cysteine and methionine metabolism
senj00290  Valine, leucine and isoleucine biosynthesis
senj00300  Lysine biosynthesis
senj00330  Arginine and proline metabolism
senj00340  Histidine metabolism
senj00380  Tryptophan metabolism
senj00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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