KEGG   PATHWAY: sgh00630
Entry
sgh00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Sinocyclocheilus grahami (golden-line barbel)
Class
Metabolism; Carbohydrate metabolism
Pathway map
sgh00630  Glyoxylate and dicarboxylate metabolism
sgh00630

Module
sgh_M00621  Glycine cleavage system [PATH:sgh00630]
sgh_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:sgh00630]
Other DBs
GO: 0046487 0043648
Organism
Sinocyclocheilus grahami (golden-line barbel) [GN:sgh]
Gene
107569626  acetyl-coenzyme A synthetase, cytoplasmic-like [KO:K01895] [EC:6.2.1.1]
107582826  acetyl-coenzyme A synthetase 2-like, mitochondrial [KO:K01895] [EC:6.2.1.1]
107551550  acetyl-coenzyme A synthetase, cytoplasmic-like isoform X1 [KO:K01895] [EC:6.2.1.1]
107559859  acetyl-coenzyme A synthetase, cytoplasmic-like isoform X1 [KO:K01895] [EC:6.2.1.1]
107590870  acetyl-coenzyme A synthetase 2-like, mitochondrial isoform X1 [KO:K01895] [EC:6.2.1.1]
107596269  acetyl-coenzyme A synthetase, cytoplasmic-like [KO:K01895] [EC:6.2.1.1]
107594420  malate dehydrogenase, cytoplasmic-like [KO:K00025] [EC:1.1.1.37]
107583563  malate dehydrogenase, cytoplasmic-like [KO:K00025] [EC:1.1.1.37]
107577772  malate dehydrogenase, cytoplasmic-like [KO:K00025] [EC:1.1.1.37]
107583187  malate dehydrogenase, cytoplasmic-like isoform X1 [KO:K00025] [EC:1.1.1.37]
107577591  malate dehydrogenase, mitochondrial [KO:K00026] [EC:1.1.1.37]
107588934  malate dehydrogenase, mitochondrial-like isoform X1 [KO:K00026] [EC:1.1.1.37]
107599367  citrate synthase, mitochondrial-like [KO:K01647] [EC:2.3.3.1]
107594000  cs; citrate synthase, mitochondrial [KO:K01647] [EC:2.3.3.1]
107554054  aconitate hydratase, mitochondrial-like [KO:K01681] [EC:4.2.1.3]
107601170  cytoplasmic aconitate hydratase [KO:K01681] [EC:4.2.1.3]
107559949  cytoplasmic aconitate hydratase [KO:K01681] [EC:4.2.1.3]
107584097  aconitate hydratase, mitochondrial-like [KO:K01681] [EC:4.2.1.3]
107565255  acetyl-CoA acetyltransferase, mitochondrial-like isoform X1 [KO:K00626] [EC:2.3.1.9]
107549121  acetyl-CoA acetyltransferase, cytosolic-like [KO:K00626] [EC:2.3.1.9]
107583377  acetyl-CoA acetyltransferase, mitochondrial [KO:K00626] [EC:2.3.1.9]
107601581  acetyl-CoA acetyltransferase, cytosolic-like [KO:K00626] [EC:2.3.1.9]
107585993  methylmalonyl-CoA epimerase, mitochondrial-like isoform X1 [KO:K05606] [EC:5.1.99.1]
107595079  methylmalonyl-CoA epimerase, mitochondrial-like isoform X1 [KO:K05606] [EC:5.1.99.1]
107588820  pcca; LOW QUALITY PROTEIN: propionyl-CoA carboxylase alpha chain, mitochondrial [KO:K01965] [EC:6.4.1.3]
107550605  pccb; propionyl-CoA carboxylase beta chain, mitochondrial isoform X1 [KO:K01966] [EC:6.4.1.3 2.1.3.15]
107586043  propionyl-CoA carboxylase beta chain, mitochondrial-like [KO:K01966] [EC:6.4.1.3 2.1.3.15]
107600108  methylmalonyl-CoA mutase, mitochondrial-like [KO:K01847] [EC:5.4.99.2]
107603104  mut; methylmalonyl-CoA mutase, mitochondrial [KO:K01847] [EC:5.4.99.2]
107552893  hydroxyacid oxidase 1-like [KO:K11517] [EC:1.1.3.15]
107569314  hydroxyacid oxidase 2-like isoform X1 [KO:K11517] [EC:1.1.3.15]
107594094  hao1; hydroxyacid oxidase 1 [KO:K11517] [EC:1.1.3.15]
107597376  hydroxyacid oxidase 2-like [KO:K11517] [EC:1.1.3.15]
107573156  catalase-like [KO:K03781] [EC:1.11.1.6]
107577507  catalase-like [KO:K03781] [EC:1.11.1.6]
107560000  catalase [KO:K03781] [EC:1.11.1.6]
107591546  glyoxylate reductase/hydroxypyruvate reductase-like isoform X1 [KO:K00049] [EC:1.1.1.79 1.1.1.81]
107601456  glyoxylate reductase/hydroxypyruvate reductase-like [KO:K00049] [EC:1.1.1.79 1.1.1.81]
107551557  grhpr; glyoxylate reductase/hydroxypyruvate reductase [KO:K00049] [EC:1.1.1.79 1.1.1.81]
107550900  glyoxylate reductase/hydroxypyruvate reductase-like isoform X1 [KO:K00049] [EC:1.1.1.79 1.1.1.81]
107594223  phosphoglycolate phosphatase-like [KO:K19269] [EC:3.1.3.18 3.1.3.48]
107584220  phosphoglycolate phosphatase-like [KO:K19269] [EC:3.1.3.18 3.1.3.48]
107552266  serine--pyruvate aminotransferase, mitochondrial-like [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
107585700  serine--pyruvate aminotransferase-like [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
107589852  serine--pyruvate aminotransferase, mitochondrial-like [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
107595722  glutamine synthetase-like [KO:K01915] [EC:6.3.1.2]
107548798  glutamine synthetase-like [KO:K01915] [EC:6.3.1.2]
107548799  glutamine synthetase-like isoform X1 [KO:K01915] [EC:6.3.1.2]
107555380  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
107553252  glutamine synthetase-like [KO:K01915] [EC:6.3.1.2]
107563291  glutamine synthetase-like [KO:K01915] [EC:6.3.1.2]
107569358  glutamine synthetase-like [KO:K01915] [EC:6.3.1.2]
107581728  serine hydroxymethyltransferase, cytosolic-like [KO:K00600] [EC:2.1.2.1]
107558142  serine hydroxymethyltransferase, mitochondrial-like [KO:K00600] [EC:2.1.2.1]
107556725  serine hydroxymethyltransferase, mitochondrial-like [KO:K00600] [EC:2.1.2.1]
107567133  gldc; glycine dehydrogenase (decarboxylating), mitochondrial [KO:K00281] [EC:1.4.4.2]
107591786  amt; aminomethyltransferase, mitochondrial [KO:K00605] [EC:2.1.2.10]
107556472  aminomethyltransferase, mitochondrial-like [KO:K00605] [EC:2.1.2.10]
107575708  dihydrolipoyl dehydrogenase, mitochondrial-like [KO:K00382] [EC:1.8.1.4]
107598889  dihydrolipoyl dehydrogenase, mitochondrial-like [KO:K00382] [EC:1.8.1.4]
107576250  dihydrolipoyl dehydrogenase, mitochondrial-like [KO:K00382] [EC:1.8.1.4]
107600162  glycine cleavage system H protein, mitochondrial-like [KO:K02437]
107564915  glycine cleavage system H protein, mitochondrial-like [KO:K02437]
107584745  glycine cleavage system H protein, mitochondrial-like [KO:K02437]
107552984  glycine cleavage system H protein, mitochondrial-like [KO:K02437]
107582346  hyi; putative hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
107552647  glycerate kinase-like [KO:K11529] [EC:2.7.1.165]
107584466  glycerate kinase isoform X1 [KO:K11529] [EC:2.7.1.165]
107588470  hoga1; 4-hydroxy-2-oxoglutarate aldolase, mitochondrial [KO:K18123] [EC:4.1.3.16]
107551368  4-hydroxy-2-oxoglutarate aldolase, mitochondrial-like [KO:K18123] [EC:4.1.3.16]
107564564  afmid; kynurenine formamidase isoform X1 [KO:K01432] [EC:3.5.1.9]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
sgh00010  Glycolysis / Gluconeogenesis
sgh00020  Citrate cycle (TCA cycle)
sgh00030  Pentose phosphate pathway
sgh00053  Ascorbate and aldarate metabolism
sgh00071  Fatty acid degradation
sgh00230  Purine metabolism
sgh00250  Alanine, aspartate and glutamate metabolism
sgh00260  Glycine, serine and threonine metabolism
sgh00620  Pyruvate metabolism
sgh00750  Vitamin B6 metabolism
sgh00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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