KEGG   PATHWAY: sgoe00630
Entry
sgoe00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Scandinavium goeteborgense
Class
Metabolism; Carbohydrate metabolism
Pathway map
sgoe00630  Glyoxylate and dicarboxylate metabolism
sgoe00630

Module
sgoe_M00012  Glyoxylate cycle [PATH:sgoe00630]
sgoe_M00621  Glycine cleavage system [PATH:sgoe00630]
Other DBs
GO: 0046487 0043648
Organism
Scandinavium goeteborgense [GN:sgoe]
Gene
A8O29_021240  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
A8O29_020930  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
A8O29_021245  aceB; malate synthase A [KO:K01638] [EC:2.3.3.9]
A8O29_002975  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
A8O29_016075  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
A8O29_013065  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
A8O29_018960  acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
A8O29_000490  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
A8O29_004680  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
A8O29_000485  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
A8O29_013550  katE; catalase HPII [KO:K03781] [EC:1.11.1.6]
A8O29_014510  ghrA; glyoxylate/hydroxypyruvate reductase GhrA [KO:K12972] [EC:1.1.1.79 1.1.1.81]
A8O29_001455  ghrB; glyoxylate/hydroxypyruvate reductase GhrB [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
A8O29_002280  gph; phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
A8O29_022270  glnA; glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
A8O29_006085  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
A8O29_004460  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
A8O29_004450  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
A8O29_019015  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
A8O29_004455  gcvH; glycine cleavage system protein GcvH [KO:K02437]
A8O29_003510  garR; 2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
A8O29_003515  garK; glycerate 2-kinase [KO:K00865] [EC:2.7.1.165]
A8O29_004970  glycerate kinase [KO:K00865] [EC:2.7.1.165]
A8O29_006395  glycerate kinase [KO:K00865] [EC:2.7.1.165]
A8O29_012240  aldA; aldehyde dehydrogenase [KO:K07248] [EC:1.2.1.22 1.2.1.21]
A8O29_009250  bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
A8O29_022210  fdnG; formate dehydrogenase-N subunit alpha [KO:K00123] [EC:1.17.1.9]
A8O29_022215  fdxH; formate dehydrogenase subunit beta [KO:K00124]
A8O29_022220  fdoI; formate dehydrogenase cytochrome b556 subunit [KO:K00127]
A8O29_009960  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
sgoe00010  Glycolysis / Gluconeogenesis
sgoe00020  Citrate cycle (TCA cycle)
sgoe00030  Pentose phosphate pathway
sgoe00053  Ascorbate and aldarate metabolism
sgoe00071  Fatty acid degradation
sgoe00230  Purine metabolism
sgoe00250  Alanine, aspartate and glutamate metabolism
sgoe00260  Glycine, serine and threonine metabolism
sgoe00620  Pyruvate metabolism
sgoe00710  Carbon fixation by Calvin cycle
sgoe00750  Vitamin B6 metabolism
sgoe00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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