KEGG   PATHWAY: smiz00010
Entry
smiz00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Sphingobacterium mizutaii
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
smiz00010  Glycolysis / Gluconeogenesis
smiz00010

Module
smiz_M00002  Glycolysis, core module involving three-carbon compounds [PATH:smiz00010]
smiz_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:smiz00010]
smiz_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:smiz00010]
Other DBs
GO: 0006096 0006094
Organism
Sphingobacterium mizutaii [GN:smiz]
Gene
4412673_03856  pgi; Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
4412673_00167  pfkA_1; 6-phosphofructokinase isozyme 1 [KO:K00850] [EC:2.7.1.11]
4412673_02880  pfkA_2; 6-phosphofructokinase isozyme 1 [KO:K00850] [EC:2.7.1.11]
4412673_01857  fbp; Fructose-1,6-bisphosphatase class 1 [KO:K03841] [EC:3.1.3.11]
4412673_02479  fbaB; Fructose-bisphosphate aldolase class 1 [KO:K11645] [EC:4.1.2.13]
4412673_01875  fba; Fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
4412673_02257  pgk_tpi; Bifunctional PGK/TIM [KO:K01803] [EC:5.3.1.1]
4412673_02882  gapA; Glyceraldehyde-3-phosphate dehydrogenase A [KO:K00134] [EC:1.2.1.12]
4412673_03700  gap_2; Glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
4412673_01315  gap_1; Glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
4412673_03041  pgk; Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
4412673_01784  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
4412673_01060  eno; Enolase [KO:K01689] [EC:4.2.1.11]
4412673_03397  pyk; Pyruvate kinase [KO:K00873] [EC:2.7.1.40]
4412673_03391  acoA; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [KO:K00161] [EC:1.2.4.1]
4412673_04065  bfmBAB; 2-oxoisovalerate dehydrogenase subunit beta [KO:K00162] [EC:1.2.4.1]
4412673_03390  pdhC_2; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex [KO:K00627] [EC:2.3.1.12]
4412673_00640  lpd; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
4412673_00643  Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
4412673_00059  calB_1; Coniferyl aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
4412673_00124  calB_2; Coniferyl aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
4412673_03182  acoD; Acetaldehyde dehydrogenase 2 [KO:K00138] [EC:1.2.1.-]
4412673_00563  acsA; Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
4412673_00625  galM; Aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
4412673_03718  mro; Aldose 1-epimerase precursor [KO:K01785] [EC:5.1.3.3]
4412673_02273  yihX; Phosphatase yihX [KO:K20866] [EC:3.1.3.10]
4412673_00050  pgcA; Phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
4412673_01856  pckA; Phosphoenolpyruvate carboxykinase [ATP] [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
smiz00020  Citrate cycle (TCA cycle)
smiz00030  Pentose phosphate pathway
smiz00500  Starch and sucrose metabolism
smiz00620  Pyruvate metabolism
smiz00640  Propanoate metabolism
smiz00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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