KEGG   PATHWAY: smr00010
Entry
smr00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Staphylothermus marinus
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
smr00010  Glycolysis / Gluconeogenesis
smr00010

Module
smr_M00002  Glycolysis, core module involving three-carbon compounds [PATH:smr00010]
smr_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:smr00010]
Other DBs
GO: 0006096 0006094
Organism
Staphylothermus marinus [GN:smr]
Gene
Smar_1514  glucokinase [KO:K25026] [EC:2.7.1.2]
Smar_1156  mannose-6-phosphate isomerase / glucose-6-phosphate isomerase [KO:K15916] [EC:5.3.1.9 5.3.1.8]
Smar_1596  fructose-bisphosphate aldolase [KO:K11645] [EC:4.1.2.13]
Smar_0902  D-fructose 1,6-bisphosphatase [KO:K01622] [EC:4.1.2.13 3.1.3.11]
Smar_0901  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
Smar_0241  glyceraldehyde-3-phosphate dehydrogenase [KO:K00150] [EC:1.2.1.59]
Smar_0240  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
Smar_0332  phosphoglycerate mutase [KO:K15635] [EC:5.4.2.12]
Smar_1274  enolase [KO:K01689] [EC:4.2.1.11]
Smar_0899  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
Smar_0141  phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
Smar_1115  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Smar_1449  pyruvate ferredoxin oxidoreductase, alpha subunit [KO:K00169] [EC:1.2.7.1]
Smar_0998  pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [KO:K00169] [EC:1.2.7.1]
Smar_1450  pyruvate ferredoxin oxidoreductase, beta subunit [KO:K00170] [EC:1.2.7.1]
Smar_0997  thiamine pyrophosphate enzyme domain protein TPP-binding [KO:K00170] [EC:1.2.7.1]
Smar_1447  pyruvate ferredoxin oxidoreductase, gamma subunit [KO:K00172] [EC:1.2.7.1]
Smar_1000  pyruvate/ketoisovalerate oxidoreductase, gamma subunit [KO:K00172] [EC:1.2.7.1]
Smar_1448  pyruvate ferredoxin oxidoreductase, delta subunit [KO:K00171] [EC:1.2.7.1]
Smar_0999  pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [KO:K00171] [EC:1.2.7.1]
Smar_1444  pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [KO:K00174] [EC:1.2.7.3 1.2.7.11]
Smar_1443  pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit [KO:K00175] [EC:1.2.7.3 1.2.7.11]
Smar_1072  Alcohol dehydrogenase GroES domain protein [KO:K13953] [EC:1.1.1.1]
Smar_0449  acetyl-CoA synthetase (ADP-forming) alpha subunit / branched-chain acyl-CoA synthetase (ADP-forming) alpha subunit [KO:K01905] [EC:6.2.1.13]
Smar_1241  CoA-binding domain protein [KO:K01905] [EC:6.2.1.13]
Smar_1242  branched-chain acyl-CoA synthetase (ADP-forming) beta subunit / acetyl-CoA synthetase (ADP-forming) beta subunit [KO:K22224] [EC:6.2.1.13]
Smar_1286  phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I [KO:K15778] [EC:5.4.2.8 5.4.2.2]
Smar_1582  glyceraldehyde-3-phosphate ferredoxin oxidoreductase [KO:K11389] [EC:1.2.7.6]
Smar_0084  nonphosphorylating glyceraldehyde-3-phosphate dehydrogenase [KO:K18978] [EC:1.2.1.90]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
smr00020  Citrate cycle (TCA cycle)
smr00030  Pentose phosphate pathway
smr00500  Starch and sucrose metabolism
smr00620  Pyruvate metabolism
smr00640  Propanoate metabolism
smr00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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