KEGG   PATHWAY: sphr00010
Entry
sphr00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Sphingobium sp. RAC03
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
sphr00010  Glycolysis / Gluconeogenesis
sphr00010

Module
sphr_M00002  Glycolysis, core module involving three-carbon compounds [PATH:sphr00010]
sphr_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:sphr00010]
sphr_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:sphr00010]
Other DBs
GO: 0006096 0006094
Organism
Sphingobium sp. RAC03 [GN:sphr]
Gene
BSY17_2459  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
BSY17_208  phosphoglucose isomerase family protein [KO:K01810] [EC:5.3.1.9]
BSY17_799  fructose-1-6-bisphosphatase family protein [KO:K03841] [EC:3.1.3.11]
BSY17_1848  glpX; fructose-1,6-bisphosphatase, class II [KO:K11532] [EC:3.1.3.11 3.1.3.37]
BSY17_176  fructose-bisphosphate aldolase class-I family protein [KO:K01623] [EC:4.1.2.13]
BSY17_2775  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
BSY17_178  gap; glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
BSY17_177  phosphoglycerate kinase family protein [KO:K00927] [EC:2.7.2.3]
BSY17_378  gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
BSY17_895  histidine phosphatase super family protein [KO:K15634] [EC:5.4.2.11]
BSY17_4195  histidine phosphatase super family protein [KO:K15634] [EC:5.4.2.11]
BSY17_398  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
BSY17_707  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
BSY17_2897  ppdK; pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
BSY17_396  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit [KO:K00161] [EC:1.2.4.1]
BSY17_395  hypothetical protein [KO:K00162] [EC:1.2.4.1]
BSY17_3902  2-oxoacid dehydrogenases acyltransferase family protein [KO:K00627] [EC:2.3.1.12]
BSY17_560  2-oxoacid dehydrogenases acyltransferase family protein [KO:K00627] [EC:2.3.1.12]
BSY17_2932  pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
BSY17_2255  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
BSY17_2934  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
BSY17_1254  L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
BSY17_3820  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
BSY17_1616  PQQ-dependent dehydrogenase, methanol/ethanol family protein [KO:K00114] [EC:1.1.2.8]
BSY17_4000  PQQ-dependent dehydrogenase, methanol/ethanol family protein [KO:K00114] [EC:1.1.2.8]
BSY17_2019  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
BSY17_3508  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
BSY17_3720  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
BSY17_3722  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
BSY17_3744  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
BSY17_3876  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
BSY17_925  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
BSY17_3994  aldehyde dehydrogenase family protein [KO:K00138] [EC:1.2.1.-]
BSY17_1611  aldehyde dehydrogenase family protein [KO:K00138] [EC:1.2.1.-]
BSY17_1769  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
BSY17_3725  AMP-binding enzyme family protein [KO:K01895] [EC:6.2.1.1]
BSY17_2554  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
BSY17_1622  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
BSY17_3531  coA binding domain protein [KO:K24012] [EC:6.2.1.13]
BSY17_1049  aldose 1-epimerase family protein [KO:K01785] [EC:5.1.3.3]
BSY17_2827  aldose 1-epimerase family protein [KO:K01785] [EC:5.1.3.3]
BSY17_204  pgm; phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
BSY17_754  pckA; phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
sphr00020  Citrate cycle (TCA cycle)
sphr00030  Pentose phosphate pathway
sphr00500  Starch and sucrose metabolism
sphr00620  Pyruvate metabolism
sphr00640  Propanoate metabolism
sphr00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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