KEGG   PATHWAY: spin00630
Entry
spin00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Skermania piniformis
Class
Metabolism; Carbohydrate metabolism
Pathway map
spin00630  Glyoxylate and dicarboxylate metabolism
spin00630

Module
spin_M00621  Glycine cleavage system [PATH:spin00630]
spin_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:spin00630]
Other DBs
GO: 0046487 0043648
Organism
Skermania piniformis [GN:spin]
Gene
KV203_02450  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
KV203_05315  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
KV203_06310  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
KV203_11970  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
KV203_10645  malate synthase G [KO:K01638] [EC:2.3.3.9]
KV203_16225  citrate synthase [KO:K01647] [EC:2.3.3.1]
KV203_16250  citrate synthase 2 [KO:K01647] [EC:2.3.3.1]
KV203_10230  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
KV203_01445  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
KV203_05110  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
KV203_05355  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
KV203_08540  thiolase family protein [KO:K00626] [EC:2.3.1.9]
KV203_13555  thiolase family protein [KO:K00626] [EC:2.3.1.9]
KV203_13720  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
KV203_13915  crotonase/enoyl-CoA hydratase family protein [KO:K00626] [EC:2.3.1.9]
KV203_14090  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
KV203_15385  bktB; beta-ketothiolase BktB [KO:K00626] [EC:2.3.1.9]
KV203_17175  thiolase domain-containing protein [KO:K00626] [EC:2.3.1.9]
KV203_17195  steroid 3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
KV203_17280  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
KV203_18225  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
KV203_18755  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
KV203_19200  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
KV203_05105  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
KV203_15685  acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
KV203_15660  acyl-CoA carboxylase subunit beta [KO:K27094] [EC:6.4.1.3 6.4.1.- 2.1.3.15]
KV203_15665  acyl-CoA carboxylase subunit epsilon [KO:K27095]
KV203_06395  acyl-CoA carboxylase subunit beta [KO:K18472] [EC:6.4.1.2 6.4.1.3 2.1.3.15]
KV203_10115  scpA; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
KV203_10120  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
KV203_07955  cobalamin-dependent protein [KO:K01849] [EC:5.4.99.2]
KV203_07950  methylmalonyl-CoA mutase [KO:K01848] [EC:5.4.99.2]
KV203_04730  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
KV203_10000  form I ribulose bisphosphate carboxylase large subunit [KO:K01601] [EC:4.1.1.39]
KV203_09995  ribulose bisphosphate carboxylase small subunit [KO:K01602] [EC:4.1.1.39]
KV203_06575  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
KV203_06675  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
KV203_14015  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
KV203_10665  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
KV203_06720  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
KV203_02415  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
KV203_10690  gcvH; glycine cleavage system protein GcvH [KO:K02437]
KV203_18465  glycerate kinase [KO:K00865] [EC:2.7.1.165]
KV203_04470  multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit [KO:K01616] [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
KV203_16810  NAD-dependent formate dehydrogenase [KO:K00122] [EC:1.17.1.9]
KV203_02655  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
spin00010  Glycolysis / Gluconeogenesis
spin00020  Citrate cycle (TCA cycle)
spin00030  Pentose phosphate pathway
spin00053  Ascorbate and aldarate metabolism
spin00071  Fatty acid degradation
spin00230  Purine metabolism
spin00250  Alanine, aspartate and glutamate metabolism
spin00260  Glycine, serine and threonine metabolism
spin00620  Pyruvate metabolism
spin00710  Carbon fixation by Calvin cycle
spin00750  Vitamin B6 metabolism
spin00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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