PATHWAY: sply01100 Help Entry sply01100                   Pathway                                 Name Metabolic pathways - Serratia inhibens Class BRITE hierarchy Pathway map sply01100   Metabolic pathways Module sply_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:sply01100] sply_M00002   Glycolysis, core module involving three-carbon compounds [PATH:sply01100] sply_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:sply01100] sply_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:sply01100] sply_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:sply01100] sply_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:sply01100] sply_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:sply01100] sply_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:sply01100] sply_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:sply01100] sply_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:sply01100] sply_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:sply01100] sply_M00012   Glyoxylate cycle [PATH:sply01100] sply_M00015   Proline biosynthesis, glutamate => proline [PATH:sply01100] sply_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:sply01100] sply_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:sply01100] sply_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:sply01100] sply_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:sply01100] sply_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:sply01100] sply_M00021   Cysteine biosynthesis, serine => cysteine [PATH:sply01100] sply_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:sply01100] sply_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:sply01100] sply_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:sply01100] sply_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:sply01100] sply_M00026   Histidine biosynthesis, PRPP => histidine [PATH:sply01100] sply_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:sply01100] sply_M00034   Methionine salvage pathway [PATH:sply01100] sply_M00035   Methionine degradation [PATH:sply01100] sply_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:sply01100] sply_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:sply01100] sply_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:sply01100] sply_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:sply01100] sply_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:sply01100] sply_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:sply01100] sply_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:sply01100] sply_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:sply01100] sply_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:sply01100] sply_M00063   CMP-KDO biosynthesis [PATH:sply01100] sply_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:sply01100] sply_M00082   Fatty acid biosynthesis, initiation [PATH:sply01100] sply_M00083   Fatty acid biosynthesis, elongation [PATH:sply01100] sply_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:sply01100] sply_M00087   beta-Oxidation [PATH:sply01100] sply_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:sply01100] sply_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:sply01100] sply_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:sply01100] sply_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:sply01100] sply_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:sply01100] sply_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:sply01100] sply_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:sply01100] sply_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:sply01100] sply_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:sply01100] sply_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:sply01100] sply_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:sply01100] sply_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:sply01100] sply_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:sply01100] sply_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:sply01100] sply_M00133   Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:sply01100] sply_M00136   GABA biosynthesis, prokaryotes, putrescine => GABA [PATH:sply01100] sply_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:sply01100] sply_M00149   Succinate dehydrogenase, prokaryotes [PATH:sply01100] sply_M00150   Fumarate reductase, prokaryotes [PATH:sply01100] sply_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:sply01100] sply_M00168   CAM (Crassulacean acid metabolism), dark [PATH:sply01100] sply_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:sply01100] sply_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:sply01100] sply_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:sply01100] sply_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:sply01100] sply_M00417   Cytochrome o ubiquinol oxidase [PATH:sply01100] sply_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:sply01100] sply_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:sply01100] sply_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:sply01100] sply_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:sply01100] sply_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:sply01100] sply_M00555   Betaine biosynthesis, choline => betaine [PATH:sply01100] sply_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:sply01100] sply_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:sply01100] sply_M00621   Glycine cleavage system [PATH:sply01100] sply_M00622   Nicotinate degradation, nicotinate => fumarate [PATH:sply01100] sply_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:sply01100] sply_M00761   Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:sply01100] sply_M00790   Pyrrolnitrin biosynthesis, tryptophan => pyrrolnitrin [PATH:sply01100] sply_M00844   Arginine biosynthesis, ornithine => arginine [PATH:sply01100] sply_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:sply01100] sply_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:sply01100] sply_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:sply01100] sply_M00878   Phenylacetate degradation, phenylaxetate => acetyl-CoA/succinyl-CoA [PATH:sply01100] sply_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:sply01100] sply_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:sply01100] sply_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:sply01100] sply_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:sply01100] sply_M00904   Dapdiamides biosynthesis, L-2,3-diaminopropanoate => dapdiamide A/B/C [PATH:sply01100] sply_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:sply01100] sply_M00918   Aerobactin biosynthesis, lysine => aerobactin [PATH:sply01100] sply_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:sply01100] sply_M00939   Pyrimidine degradation, uracil => 3-hydroxypropanoate [PATH:sply01100] sply_M00948   Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:sply01100] sply_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:sply01100] sply_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:sply01100] sply_M00970   Proline degradation, proline => glutamate [PATH:sply01100] Organism Serratia inhibens [GN:sply] Related pathway sply00010   Glycolysis / Gluconeogenesis sply00020   Citrate cycle (TCA cycle) sply00030   Pentose phosphate pathway sply00040   Pentose and glucuronate interconversions sply00051   Fructose and mannose metabolism sply00052   Galactose metabolism sply00053   Ascorbate and aldarate metabolism sply00061   Fatty acid biosynthesis sply00071   Fatty acid degradation sply00130   Ubiquinone and other terpenoid-quinone biosynthesis sply00190   Oxidative phosphorylation sply00220   Arginine biosynthesis sply00230   Purine metabolism sply00240   Pyrimidine metabolism sply00250   Alanine, aspartate and glutamate metabolism sply00260   Glycine, serine and threonine metabolism sply00261   Monobactam biosynthesis sply00270   Cysteine and methionine metabolism sply00280   Valine, leucine and isoleucine degradation sply00290   Valine, leucine and isoleucine biosynthesis sply00300   Lysine biosynthesis sply00310   Lysine degradation sply00330   Arginine and proline metabolism sply00332   Carbapenem biosynthesis sply00340   Histidine metabolism sply00350   Tyrosine metabolism sply00360   Phenylalanine metabolism sply00361   Chlorocyclohexane and chlorobenzene degradation sply00362   Benzoate degradation sply00364   Fluorobenzoate degradation sply00380   Tryptophan metabolism sply00400   Phenylalanine, tyrosine and tryptophan biosynthesis sply00401   Novobiocin biosynthesis sply00404   Staurosporine biosynthesis sply00410   beta-Alanine metabolism sply00430   Taurine and hypotaurine metabolism sply00440   Phosphonate and phosphinate metabolism sply00450   Selenocompound metabolism sply00460   Cyanoamino acid metabolism sply00470   D-Amino acid metabolism sply00480   Glutathione metabolism sply00500   Starch and sucrose metabolism sply00511   Other glycan degradation sply00520   Amino sugar and nucleotide sugar metabolism sply00521   Streptomycin biosynthesis sply00523   Polyketide sugar unit biosynthesis sply00525   Acarbose and validamycin biosynthesis sply00540   Lipopolysaccharide biosynthesis sply00541   O-Antigen nucleotide sugar biosynthesis sply00542   O-Antigen repeat unit biosynthesis sply00543   Exopolysaccharide biosynthesis sply00550   Peptidoglycan biosynthesis sply00552   Teichoic acid biosynthesis sply00561   Glycerolipid metabolism sply00562   Inositol phosphate metabolism sply00564   Glycerophospholipid metabolism sply00565   Ether lipid metabolism sply00592   alpha-Linolenic acid metabolism sply00600   Sphingolipid metabolism sply00620   Pyruvate metabolism sply00623   Toluene degradation sply00625   Chloroalkane and chloroalkene degradation sply00626   Naphthalene degradation sply00627   Aminobenzoate degradation sply00630   Glyoxylate and dicarboxylate metabolism sply00633   Nitrotoluene degradation sply00640   Propanoate metabolism sply00650   Butanoate metabolism sply00660   C5-Branched dibasic acid metabolism sply00670   One carbon pool by folate sply00680   Methane metabolism sply00710   Carbon fixation by Calvin cycle sply00720   Other carbon fixation pathways sply00730   Thiamine metabolism sply00740   Riboflavin metabolism sply00750   Vitamin B6 metabolism sply00760   Nicotinate and nicotinamide metabolism sply00770   Pantothenate and CoA biosynthesis sply00780   Biotin metabolism sply00785   Lipoic acid metabolism sply00790   Folate biosynthesis sply00791   Atrazine degradation sply00860   Porphyrin metabolism sply00900   Terpenoid backbone biosynthesis sply00903   Limonene degradation sply00907   Pinene, camphor and geraniol degradation sply00910   Nitrogen metabolism sply00920   Sulfur metabolism sply00930   Caprolactam degradation sply00946   Degradation of flavonoids sply00997   Biosynthesis of various other secondary metabolites sply00998   Biosynthesis of various antibiotics sply00999   Biosynthesis of various plant secondary metabolites sply01040   Biosynthesis of unsaturated fatty acids sply01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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