PATHWAY: sply00240 Help Entry sply00240                   Pathway                                 Name Pyrimidine metabolism - Serratia inhibens Class Metabolism; Nucleotide metabolism BRITE hierarchy Pathway map sply00240   Pyrimidine metabolism Ortholog table Module sply_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:sply00240] sply_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:sply00240] sply_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:sply00240] sply_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:sply00240] sply_M00939   Pyrimidine degradation, uracil => 3-hydroxypropanoate [PATH:sply00240] Other DBs GO:  0006220 0006213 Organism Serratia inhibens [GN:sply] Gene Q5A_003065   carB; Carbamoyl-phosphate synthase large chain [KO:K01955] [EC:6.3.5.5] Q5A_003060   carA; Carbamoyl-phosphate synthase small chain [KO:K01956] [EC:6.3.5.5] Q5A_002310   pyrB; Aspartate carbamoyltransferase [KO:K00609] [EC:2.1.3.2] Q5A_002305   pyrI; Aspartate carbamoyltransferase regulatory chain [KO:K00610] Q5A_009395   pyrC; Dihydroorotase [KO:K01465] [EC:3.5.2.3] Q5A_022810   Deacetylase [KO:K01465] [EC:3.5.2.3] Q5A_008645   pyrD; Dihydroorotate dehydrogenase (quinone) [KO:K00254] [EC:1.3.5.2] Q5A_025175   pyrE_2; Orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10] Q5A_013835   pyrF; Orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23] Q5A_019990   pyrH; Uridylate kinase [KO:K09903] [EC:2.7.4.22] Q5A_019110   ndk; Nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6] Q5A_003495   mazG; Nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9] Q5A_022985   yhdE; Maf-like protein YhdE [KO:K06287] [EC:3.6.1.-] Q5A_022485   hypothetical protein [KO:K07043] [EC:3.6.1.-] Q5A_003505   pyrG_1; CTP synthase [KO:K01937] [EC:6.3.4.2] Q5A_008485   cmk_1; Cytidylate kinase [KO:K00945] [EC:2.7.4.25] Q5A_014175   nudG; CTP pyrophosphohydrolase [KO:K08320] [EC:3.6.1.65] Q5A_007825   udk; Uridine kinase [KO:K00876] [EC:2.7.1.48] Q5A_005320   mggB; Mannosylglucosyl-3-phosphoglycerate phosphatase [KO:K11751] [EC:3.1.3.5 3.6.1.45] Q5A_003630   surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6] Q5A_006140   nagD; Ribonucleotide monophosphatase NagD [KO:K02566] [EC:3.1.3.5] Q5A_022895   rihB; Pyrimidine-specific ribonucleoside hydrolase RihB [KO:K25589] [EC:3.2.2.2 3.2.2.3] Q5A_001100   udp; Uridine phosphorylase [KO:K00757] [EC:2.4.2.3] Q5A_004665   hypothetical protein [KO:K09913] [EC:2.4.2.1 2.4.2.2] Q5A_018720   upp; Uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9] Q5A_001820   cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase [KO:K01119] [EC:3.1.4.16 3.1.3.6] Q5A_006385   yfkN; Trifunctional nucleotide phosphoesterase protein YfkN [KO:K01119] [EC:3.1.4.16 3.1.3.6] Q5A_006040   rihA; Pyrimidine-specific ribonucleoside hydrolase RihA [KO:K01250] [EC:3.2.2.-] Q5A_020055   ygdH; LOG family protein YgdH [KO:K06966] [EC:3.2.2.10 3.2.2.-] Q5A_007780   cdd; Cytidine deaminase [KO:K01489] [EC:3.5.4.5] Q5A_023920   codA; Cytosine deaminase [KO:K01485] [EC:3.5.4.1 3.5.4.21] Q5A_002235   nrdD; Anaerobic ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6] Q5A_007830   dcd; Deoxycytidine triphosphate deaminase [KO:K01494] [EC:3.5.4.13] Q5A_019655   nrdE; Ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1] Q5A_017295   nrdA; Ribonucleoside-diphosphate reductase 1 subunit alpha [KO:K00525] [EC:1.17.4.1] Q5A_019660   nrdF; Ribonucleoside-diphosphate reductase 2 subunit beta [KO:K00526] [EC:1.17.4.1] Q5A_017300   nrdB; Ribonucleoside-diphosphate reductase 1 subunit beta [KO:K00526] [EC:1.17.4.1] Q5A_017520   yfbR_1; 5'-deoxynucleotidase YfbR [KO:K08722] [EC:3.1.3.89] Q5A_009475   tmk; Thymidylate kinase [KO:K00943] [EC:2.7.4.9] Q5A_025165   dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23] Q5A_002820   deoA; Thymidine phosphorylase [KO:K00758] [EC:2.4.2.4] Q5A_014105   tdk; Thymidine kinase [KO:K00857] [EC:2.7.1.21] Q5A_020170   thyA; Thymidylate synthase [KO:K00560] [EC:2.1.1.45] Q5A_013435   amaB; N-carbamoyl-L-amino acid hydrolase [KO:K06016] [EC:3.5.1.6 3.5.1.87] Q5A_009030   rutA; Pyrimidine monooxygenase RutA [KO:K09018] [EC:1.14.99.46] Q5A_009010   rutF; FMN reductase (NADH) RutF [KO:K09024] [EC:1.5.1.-] Q5A_009025   rutB_1; Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB [KO:K09020] [EC:3.5.1.110] Q5A_009020   rutC; Putative aminoacrylate peracid reductase RutC [KO:K09021] Q5A_009015   rutD; Putative aminoacrylate hydrolase RutD [KO:K09023] [EC:3.5.1.-] Q5A_011745   ydfG_1; NADP-dependent 3-hydroxy acid dehydrogenase YdfG [KO:K16066] [EC:1.1.1.381 1.1.1.-] Compound C00015   UDP C00039   DNA C00046   RNA C00055   CMP C00063   CTP C00064   L-Glutamine C00075   UTP C00086   Urea C00099   beta-Alanine C00105   UMP C00106   Uracil C00112   CDP C00119   5-Phospho-alpha-D-ribose 1-diphosphate C00169   Carbamoyl phosphate C00178   Thymine C00214   Thymidine C00222   3-Oxopropanoate C00239   dCMP C00295   Orotate C00299   Uridine C00337   (S)-Dihydroorotate C00363   dTDP C00364   dTMP C00365   dUMP C00380   Cytosine C00383   Malonate C00429   5,6-Dihydrouracil C00438   N-Carbamoyl-L-aspartate C00458   dCTP C00459   dTTP C00460   dUTP C00475   Cytidine C00526   Deoxyuridine C00672   2-Deoxy-D-ribose 1-phosphate C00705   dCDP C00813   Barbiturate C00881   Deoxycytidine C00941   3',5'-Cyclic CMP C01013   3-Hydroxypropanoate C01103   Orotidine 5'-phosphate C01168   Pseudouridine 5'-phosphate C01205   (R)-3-Amino-2-methylpropanoate C01346   dUDP C01368   3'-UMP C01563   Carbamate C02067   Pseudouridine C02170   Methylmalonate C02354   2',3'-Cyclic CMP C02355   2',3'-Cyclic UMP C02376   5-Methylcytosine C02642   3-Ureidopropionate C03997   5-Hydroxymethyldeoxycytidylate C05281   5-Methylbarbiturate C05822   3'-CMP C06198   P1,P4-Bis(5'-uridyl) tetraphosphate C11038   2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate C11039   2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate C15607   3-Oxo-3-ureidopropanoate C20231   (Z)-3-Ureidoacrylate peracid C20249   (Z)-3-Peroxyaminoacrylate C20253   Aminoacrylate C20254   Ureidoacrylate C20846   3-Oxo-3-ureidoisobutyrate C21028   (R)-5,6-Dihydrothymine C21029   (R)-3-Ureidoisobutyrate C22509   3',5'-Cyclic UMP Related pathway sply00030   Pentose phosphate pathway sply00220   Arginine biosynthesis sply00250   Alanine, aspartate and glutamate metabolism sply00280   Valine, leucine and isoleucine degradation sply00410   beta-Alanine metabolism KO pathway ko00240     LinkDB All DBs

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