KEGG   PATHWAY: sply00520
Entry
sply00520                   Pathway                                
Name
Amino sugar and nucleotide sugar metabolism - Serratia inhibens
Class
Metabolism; Carbohydrate metabolism
Pathway map
sply00520  Amino sugar and nucleotide sugar metabolism
sply00520

Module
sply_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:sply00520]
sply_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:sply00520]
sply_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:sply00520]
sply_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:sply00520]
Other DBs
GO: 0006040 0009225
Organism
Serratia inhibens [GN:sply]
Gene
Q5A_000560  chiA; Chitinase A [KO:K01183] [EC:3.2.1.14]
Q5A_006135  chiD; Chitinase D [KO:K01183] [EC:3.2.1.14]
Q5A_014220  chiA1; Chitinase A1 [KO:K01183] [EC:3.2.1.14]
Q5A_018380  chiB; Chitinase B [KO:K01183] [EC:3.2.1.14]
Q5A_009615  nagZ; Beta-hexosaminidase [KO:K01207] [EC:3.2.1.52]
Q5A_006180  chb; Chitobiase [KO:K12373] [EC:3.2.1.52]
Q5A_018245  crr; Glucose-specific phosphotransferase enzyme IIA component [KO:K02777] [EC:2.7.1.-]
Q5A_006160  ptsG_1; PTS system glucose-specific EIICBA component [KO:K02804] [EC:2.7.1.193]
Q5A_010055  nagK; N-acetyl-D-glucosamine kinase [KO:K00884] [EC:2.7.1.59]
Q5A_006150  nagA; N-acetylglucosamine-6-phosphate deacetylase [KO:K01443] [EC:3.5.1.25]
Q5A_006155  nagB; Glucosamine-6-phosphate deaminase [KO:K02564] [EC:3.5.99.6]
Q5A_004720  mak; Fructokinase [KO:K00847] [EC:2.7.1.4]
Q5A_022060  kdgK_2; 2-dehydro-3-deoxygluconokinase [KO:K00847] [EC:2.7.1.4]
Q5A_025505  glmS; Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [KO:K00820] [EC:2.6.1.16]
Q5A_001980  glmM; Phosphoglucosamine mutase [KO:K03431] [EC:5.4.2.10]
Q5A_025500  glmU; Bifunctional protein GlmU [KO:K04042] [EC:2.7.7.23 2.3.1.157]
Q5A_019315  murQ; N-acetylmuramic acid 6-phosphate etherase [KO:K07106] [EC:4.2.1.126]
Q5A_011305  anmK; Anhydro-N-acetylmuramic acid kinase [KO:K09001] [EC:2.7.1.170]
Q5A_022690  murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [KO:K00790] [EC:2.5.1.7]
Q5A_001240  murB; UDP-N-acetylenolpyruvoylglucosamine reductase [KO:K00075] [EC:1.3.1.98]
Q5A_000690  wecB; UDP-N-acetylglucosamine 2-epimerase [KO:K01791] [EC:5.1.3.14]
Q5A_000695  wbpA; UDP-N-acetyl-D-glucosamine 6-dehydrogenase [KO:K02472] [EC:1.1.1.336]
Q5A_010900  arnA; Bifunctional polymyxin resistance protein ArnA [KO:K10011] [EC:2.1.2.13 1.1.1.305]
Q5A_010890  arnB; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase [KO:K07806] [EC:2.6.1.87]
Q5A_010895  arnC; Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [KO:K10012] [EC:2.4.2.53]
Q5A_010905  arnD; putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD [KO:K13014] [EC:3.5.1.-]
Q5A_011455  xynB; Beta-xylosidase [KO:K01198] [EC:3.2.1.37]
Q5A_009490  ptsG_2; PTS system glucose-specific EIICB component [KO:K02779] [EC:2.7.1.199]
Q5A_011625  malX; PTS system maltose- and glucose-specific EIICB component [KO:K02791] [EC:2.7.1.199 2.7.1.208]
Q5A_019125  malP_3; PTS system maltose-specific EIICB component [KO:K02791] [EC:2.7.1.199 2.7.1.208]
Q5A_018010  glk; Glucokinase [KO:K00845] [EC:2.7.1.2]
Q5A_006230  pgm; Phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
Q5A_007850  galU_1; UTP--glucose-1-phosphate uridylyltransferase [KO:K00963] [EC:2.7.7.9]
Q5A_007855  galF; UTP--glucose-1-phosphate uridylyltransferase [KO:K00963] [EC:2.7.7.9]
Q5A_014130  galU_2; UTP--glucose-1-phosphate uridylyltransferase [KO:K00963] [EC:2.7.7.9]
Q5A_014125  tuaD; UDP-glucose 6-dehydrogenase TuaD [KO:K00012] [EC:1.1.1.22]
Q5A_006515  galK; Galactokinase [KO:K00849] [EC:2.7.1.6]
Q5A_006520  galT; Galactose-1-phosphate uridylyltransferase [KO:K00965] [EC:2.7.7.12]
Q5A_007945  galE_3; UDP-glucose 4-epimerase [KO:K01784] [EC:5.1.3.2]
Q5A_005395  galE_1; UDP-glucose 4-epimerase [KO:K01784] [EC:5.1.3.2]
Q5A_006190  galE_2; UDP-glucose 4-epimerase [KO:K01784] [EC:5.1.3.2]
Q5A_014120  wbgU; UDP-N-acetylglucosamine 4-epimerase [KO:K08679] [EC:5.1.3.6]
Q5A_014735  manX; PTS system mannose-specific EIIAB component [KO:K02794] [EC:2.7.1.191]
Q5A_014740  manY; Mannose permease IIC component [KO:K02795]
Q5A_014745  manZ; Mannose permease IID component [KO:K02796]
Q5A_023335  pgi; Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
Q5A_011670  manA; Mannose-6-phosphate isomerase [KO:K01809] [EC:5.3.1.8]
Q5A_007940  algC_1; Phosphomannomutase/phosphoglucomutase [KO:K01840] [EC:5.4.2.8]
Q5A_007955  algC_2; Phosphomannomutase/phosphoglucomutase [KO:K01840] [EC:5.4.2.8]
Q5A_007935  manC1_1; Mannose-1-phosphate guanylyltransferase 1 [KO:K00971] [EC:2.7.7.13]
Q5A_007950  manC1_2; Mannose-1-phosphate guanylyltransferase 1 [KO:K00971] [EC:2.7.7.13]
Q5A_007980  gmd; GDP-mannose 4,6-dehydratase [KO:K01711] [EC:4.2.1.47]
Q5A_007985  tld; GDP-6-deoxy-D-talose 4-dehydrogenase [KO:K22252] [EC:1.1.1.135]
Q5A_024180  glgC; Glucose-1-phosphate adenylyltransferase [KO:K00975] [EC:2.7.7.27]
Compound
C00029  UDP-glucose
C00031  D-Glucose
C00043  UDP-N-acetyl-alpha-D-glucosamine
C00052  UDP-alpha-D-galactose
C00085  D-Fructose 6-phosphate
C00095  D-Fructose
C00096  GDP-mannose
C00103  D-Glucose 1-phosphate
C00128  CMP-N-acetylneuraminate
C00140  N-Acetyl-D-glucosamine
C00159  D-Mannose
C00167  UDP-glucuronate
C00181  D-Xylose
C00190  UDP-D-xylose
C00191  D-Glucuronate
C00203  UDP-N-acetyl-D-galactosamine
C00216  D-Arabinose
C00259  L-Arabinose
C00267  alpha-D-Glucose
C00270  N-Acetylneuraminate
C00275  D-Mannose 6-phosphate
C00325  GDP-L-fucose
C00329  D-Glucosamine
C00333  D-Galacturonate
C00352  D-Glucosamine 6-phosphate
C00357  N-Acetyl-D-glucosamine 6-phosphate
C00394  GDP-glucose
C00446  alpha-D-Galactose 1-phosphate
C00461  Chitin
C00498  ADP-glucose
C00501  CDP-glucose
C00617  UDP-D-galacturonate
C00636  D-Mannose 1-phosphate
C00645  N-Acetyl-D-mannosamine
C00668  alpha-D-Glucose 6-phosphate
C00714  Pectin
C00734  Chitosan
C00935  UDP-L-arabinose
C00976  GDP-D-mannuronate
C00984  alpha-D-Galactose
C00996  Ferricytochrome b5
C00999  Ferrocytochrome b5
C01019  L-Fucose
C01050  UDP-N-acetylmuramate
C01132  N-Acetyl-D-galactosamine
C01170  UDP-N-acetyl-D-mannosamine
C01219  CDP-4-dehydro-6-deoxy-D-glucose
C01222  GDP-4-dehydro-6-deoxy-D-mannose
C01623  UDP-apiose
C01674  Chitobiose
C01788  CDP-abequose
C02199  UDP-L-rhamnose
C02280  GDP-L-galactose
C02352  1,4-beta-D-Xylan
C02474  Arabinan
C02713  N-Acetylmuramate
C02977  GDP-6-deoxy-D-talose
C02985  L-Fucose 1-phosphate
C03117  GDP-6-deoxy-D-mannose
C03410  N-Glycoloyl-neuraminate
C03598  CDP-3,6-dideoxy-D-glucose
C03599  CDP-3,6-dideoxy-D-mannose
C03691  CMP-N-glycoloylneuraminate
C03733  UDP-alpha-D-galactofuranose
C03906  beta-L-Arabinose 1-phosphate
C04037  1-Phospho-alpha-D-galacturonate
C04089  UDP-4-dehydro-6-deoxy-D-glucose
C04257  N-Acetyl-D-mannosamine 6-phosphate
C04297  CDP-4-dehydro-3,6-dideoxy-D-glucose
C04501  N-Acetyl-alpha-D-glucosamine 1-phosphate
C04573  UDP-N-acetyl-2-amino-2-deoxy-D-glucuronate
C04613  UDP-2-acetamido-4-dehydro-2,6-dideoxyglucose
C04630  UDP-2-acetamido-4-amino-2,4,6-trideoxy-alpha-D-glucose
C04631  UDP-N-acetyl-3-(1-carboxyvinyl)-D-glucosamine
C05385  D-Glucuronate 1-phosphate
C06023  D-Glucosaminide
C06156  alpha-D-Glucosamine 1-phosphate
C06240  UDP-N-acetyl-D-mannosaminouronate
C06241  N-Acetylneuraminate 9-phosphate
C06377  D-Galactosamine 6-phosphate
C11521  UDP-6-sulfoquinovose
C13952  UDP-N-acetyl-D-galactosaminuronic acid
C15925  GDP-L-gulose
C16153  UDP-L-Ara4N
C16154  UDP-L-Ara4FN
C16155  UDP-L-Ara4O
C16156  Undecaprenyl phosphate alpha-L-Ara4FN
C16157  Undecaprenyl phosphate alpha-L-Ara4N
C16183  alpha-D-Arabinopyranose 1-phosphate
C16698  N-Acetylmuramic acid 6-phosphate
C17269  GDP-D-arabinopyranose
C17326  CDP-4-dehydro-3,6-dideoxy-D-glucose epimer
C17327  CDP-ascarylose
C17328  UDP-4-keto-rhamnose
C18060  N-Acetyl-alpha-D-galactosamine 1-phosphate
C18094  UDP-L-arabinofuranose
C19725  UDP-2,3-diacetamido-2,3-dideoxy-alpha-D-glucuronate
C19745  UDP-2,3-diacetamido-2,3-dideoxy-alpha-D-mannuronate
C19769  1,6-Anhydro-N-acetyl-beta-muramate
C19823  UDP-2-acetamido-2,6-dideoxy-beta-L-arabino-hexos-4-ulose
C19961  UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine
C19971  UDP-2,4-bis(acetamido)-2,4,6-trideoxy-beta-L-altropyranose
C19972  2,4-Bis(acetamido)-2,4,6-trideoxy-beta-L-altropyranose
C20082  Pseudaminic acid
C20083  CMP-pseudaminic acid
C20357  UDP-N,N'-diacetylbacillosamine
C20359  UDP-2-acetamido-3-amino-2,3-dideoxy-alpha-D-glucuronate
C20395  UDP-2-acetamido-2-deoxy-alpha-D-ribo-hex-3-uluronate
C20418  N,N'-Diacetyllegionaminate
C20419  CMP-N,N'-diacetyllegionaminate
C20424  2,4-Diacetamido-2,4,6-trideoxy-D-mannopyranose
C20638  GDP-4-amino-4,6-dideoxy-alpha-D-mannose
C20672  GDP-4-acetamido-4,6-dideoxy-alpha-D-mannose
C20934  3-Deoxy-D-glycero-D-galacto-non-2-ulopyranosonate
C21027  N-Acetylmuramic acid alpha-1-phosphate
C21383  3-Deoxy-D-glycero-D-galacto-non-2-ulopyranosonate 9-phosphate
C21384  CMP-3-deoxy-D-glycero-D-galacto-non-2-ulopyranosonate
C22029  alpha-D-Galactosamine 1-phosphate
C22938  UDP-N-acetyl-alpha-D-xylosamine
Reference
PMID:2793832
  Authors
Wyk P, Reeves P
  Title
Identification and sequence of the gene for abequose synthase, which confers antigenic specificity on group B salmonellae: homology with galactose epimerase.
  Journal
J Bacteriol 171:5687-93 (1989)
DOI:10.1128/JB.171.10.5687-5693.1989
Reference
PMID:8071227
  Authors
Thorson JS, Lo SF, Ploux O, He X, Liu HW
  Title
Studies of the biosynthesis of 3,6-dideoxyhexoses: molecular cloning and characterization of the asc (ascarylose) region from Yersinia pseudotuberculosis serogroup VA.
  Journal
J Bacteriol 176:5483-93 (1994)
DOI:10.1128/JB.176.17.5483-5493.1994
Reference
PMID:8444803
  Authors
Kessler AC, Haase A, Reeves PR
  Title
Molecular analysis of the 3,6-dideoxyhexose pathway genes of Yersinia pseudotuberculosis serogroup IIA.
  Journal
J Bacteriol 175:1412-22 (1993)
DOI:10.1128/JB.175.5.1412-1422.1993
Reference
PMID:9811644
  Authors
Danese PN, Oliver GR, Barr K, Bowman GD, Rick PD, Silhavy TJ
  Title
Accumulation of the enterobacterial common antigen lipid II biosynthetic intermediate stimulates degP transcription in Escherichia coli.
  Journal
J Bacteriol 180:5875-84 (1998)
DOI:10.1128/JB.180.22.5875-5884.1998
Reference
  Authors
Skurnik M, Peippo A, Ervela E
  Title
Characterization of the O-antigen gene clusters of Yersinia pseudotuberculosis and the cryptic O-antigen gene cluster of Yersinia pestis shows that the plague bacillus is most closely related to and has evolved from Y. pseudotuberculosis serotype O:1b.
  Journal
Mol Microbiol 37:316-30 (2000)
DOI:10.1046/j.1365-2958.2000.01993.x
Reference
  Authors
Stover CK, Pham XQ, Erwin AL, Mizoguchi SD, Warrener P, Hickey MJ, Brinkman FS, Hufnagle WO, Kowalik DJ, Lagrou M, Garber RL, Goltry L, Tolentino E, Westbrock-Wadman S, Yuan Y, Brody LL, Coulter SN, Folger KR, Kas A, Larbig K, Lim R, Smith K, Spencer D, Wong GK, Wu Z, Paulsen IT, Reizer J, Saier MH, Hancock RE, Lory S, Olson MV
  Title
Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen.
  Journal
Nature 406:959-64 (2000)
DOI:10.1038/35023079
Reference
  Authors
Ringenberg M, Lichtensteiger C, Vimr E
  Title
Redirection of sialic acid metabolism in genetically engineered Escherichia coli.
  Journal
Glycobiology 11:533-9 (2001)
DOI:10.1093/glycob/11.7.533
Reference
  Authors
McCoy AJ, Sandlin RC, Maurelli AT
  Title
In vitro and in vivo functional activity of Chlamydia MurA, a UDP-N-acetylglucosamine enolpyruvyl transferase involved in peptidoglycan synthesis and fosfomycin resistance.
  Journal
J Bacteriol 185:1218-28 (2003)
DOI:10.1128/JB.185.4.1218-1228.2003
Reference
  Authors
JACOBSON B, DAVIDSON EA
  Title
Biosynthesis of uronic acids by skin enzymes. I. Uridine diphosphate-D-glucuronic acid-5-epimerase.
  Journal
J Biol Chem 237:638-42 (1962)
Reference
  Authors
Seifert GJ
  Title
Nucleotide sugar interconversions and cell wall biosynthesis: how to bring the inside to the outside.
  Journal
Curr Opin Plant Biol 7:277-84 (2004)
DOI:10.1016/j.pbi.2004.03.004
Reference
  Authors
Uehara T, Park JT
  Title
The N-acetyl-D-glucosamine kinase of Escherichia coli and its role in murein recycling.
  Journal
J Bacteriol 186:7273-9 (2004)
DOI:10.1128/JB.186.21.7273-7279.2004
Reference
  Authors
Breazeale SD, Ribeiro AA, McClerren AL, Raetz CR.
  Title
A formyltransferase required for polymyxin resistance in Escherichia coli and the modification of lipid A with 4-Amino-4-deoxy-L-arabinose. Identification and function oF UDP-4-deoxy-4-formamido-L-arabinose.
  Journal
J Biol Chem 280:14154-67 (2005)
DOI:10.1074/jbc.M414265200
Reference
  Authors
Williams GJ, Breazeale SD, Raetz CR, Naismith JH.
  Title
Structure and function of both domains of ArnA, a dual function decarboxylase and a formyltransferase, involved in 4-amino-4-deoxy-L-arabinose biosynthesis.
  Journal
J Biol Chem 280:23000-8 (2005)
DOI:10.1074/jbc.M501534200
Reference
  Authors
Maliekal P, Vertommen D, Delpierre G, Van Schaftingen E
  Title
Identification of the sequence encoding N-acetylneuraminate-9-phosphate phosphatase.
  Journal
Glycobiology 16:165-72 (2006)
DOI:10.1093/glycob/cwj050
Reference
  Authors
Campbell CT, Yarema KJ
  Title
Large-scale approaches for glycobiology.
  Journal
Genome Biol 6:236 (2005)
DOI:10.1186/gb-2005-6-11-236
Reference
  Authors
Uehara T, Suefuji K, Jaeger T, Mayer C, Park JT
  Title
MurQ Etherase is required by Escherichia coli in order to metabolize anhydro-N-acetylmuramic acid obtained either from the environment or from its own cell wall.
  Journal
J Bacteriol 188:1660-2 (2006)
DOI:10.1128/JB.188.4.1660-1662.2006
Reference
  Authors
Lanot A, Hodge D, Jackson RG, George GL, Elias L, Lim EK, Vaistij FE, Bowles DJ
  Title
The glucosyltransferase UGT72E2 is responsible for monolignol 4-O-glucoside production in Arabidopsis thaliana.
  Journal
Plant J 48:286-95 (2006)
DOI:10.1111/j.1365-313X.2006.02872.x
Reference
  Authors
Muller R, Morant M, Jarmer H, Nilsson L, Nielsen TH
  Title
Genome-wide analysis of the Arabidopsis leaf transcriptome reveals interaction of phosphate and sugar metabolism.
  Journal
Plant Physiol 143:156-71 (2007)
DOI:10.1104/pp.106.090167
Reference
  Authors
Oka T, Nemoto T, Jigami Y
  Title
Functional analysis of Arabidopsis thaliana RHM2/MUM4, a multidomain protein involved in UDP-D-glucose to UDP-L-rhamnose conversion.
  Journal
J Biol Chem 282:5389-403 (2007)
DOI:10.1074/jbc.M610196200
Reference
  Authors
Greenberg DE, Porcella SF, Zelazny AM, Virtaneva K, Sturdevant DE, Kupko JJ 3rd, Barbian KD, Babar A, Dorward DW, Holland SM.
  Title
Genome sequence analysis of the emerging human pathogenic acetic acid bacterium Granulibacter bethesdensis.
  Journal
J Bacteriol 189:8727-36 (2007)
DOI:10.1128/JB.00793-07
Reference
  Authors
Kotake T, Hojo S, Tajima N, Matsuoka K, Koyama T, Tsumuraya Y
  Title
A bifunctional enzyme with L-fucokinase and GDP-L-fucose pyrophosphorylase activities salvages free L-fucose in Arabidopsis.
  Journal
J Biol Chem 283:8125-35 (2008)
DOI:10.1074/jbc.M710078200
Reference
  Authors
Vorholter FJ, Schneiker S, Goesmann A, Krause L, Bekel T, Kaiser O, Linke B, Patschkowski T, Ruckert C, Schmid J, Sidhu VK, Sieber V, Tauch A, Watt SA, Weisshaar B, Becker A, Niehaus K, Puhler A.
  Title
The genome of Xanthomonas campestris pv. campestris B100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis.
  Journal
J Biotechnol 134:33-45 (2008)
DOI:10.1016/j.jbiotec.2007.12.013
Reference
  Authors
Albermann C, Piepersberg W
  Title
Expression and identification of the RfbE protein from Vibrio cholerae O1 and its use for the enzymatic synthesis of GDP-D-perosamine.
  Journal
Glycobiology 11:655-61 (2001)
DOI:10.1093/glycob/11.8.655
Related
pathway
sply00010  Glycolysis / Gluconeogenesis
sply00040  Pentose and glucuronate interconversions
sply00051  Fructose and mannose metabolism
sply00052  Galactose metabolism
sply00053  Ascorbate and aldarate metabolism
sply00500  Starch and sucrose metabolism
sply00523  Polyketide sugar unit biosynthesis
sply00525  Acarbose and validamycin biosynthesis
sply00540  Lipopolysaccharide biosynthesis
sply00550  Peptidoglycan biosynthesis
KO pathway
ko00520   
LinkDB

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