KEGG   PATHWAY: sply00040
Entry
sply00040                   Pathway                                
Name
Pentose and glucuronate interconversions - Serratia inhibens
Class
Metabolism; Carbohydrate metabolism
Pathway map
sply00040  Pentose and glucuronate interconversions
sply00040

Module
sply_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:sply00040]
Organism
Serratia inhibens [GN:sply]
Gene
Q5A_010730  kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [KO:K01815] [EC:5.3.1.17]
Q5A_010725  kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [KO:K00065] [EC:1.1.1.127]
Q5A_022520  uxaC; Uronate isomerase [KO:K01812] [EC:5.3.1.12]
Q5A_022515  uxaA; Altronate dehydratase [KO:K01685] [EC:4.2.1.7]
Q5A_017115  uxuA; Mannonate dehydratase [KO:K01686] [EC:4.2.1.8]
Q5A_018875  D-galactonate dehydratase family member [KO:K08323] [EC:4.2.1.8]
Q5A_017120  por; Polyol:NADP oxidoreductase [KO:K00040] [EC:1.1.1.57]
Q5A_018890  mtlK; Mannitol 2-dehydrogenase [KO:K00040] [EC:1.1.1.57]
Q5A_018880  rspB; Starvation-sensing protein RspB [KO:K08322] [EC:1.1.1.380]
Q5A_014125  tuaD; UDP-glucose 6-dehydrogenase TuaD [KO:K00012] [EC:1.1.1.22]
Q5A_007850  galU_1; UTP--glucose-1-phosphate uridylyltransferase [KO:K00963] [EC:2.7.7.9]
Q5A_007855  galF; UTP--glucose-1-phosphate uridylyltransferase [KO:K00963] [EC:2.7.7.9]
Q5A_014130  galU_2; UTP--glucose-1-phosphate uridylyltransferase [KO:K00963] [EC:2.7.7.9]
Q5A_020880  dlgD; 2,3-diketo-L-gulonate reductase [KO:K08092] [EC:1.1.1.130]
Q5A_020895  lyx_2; L-xylulose/3-keto-L-gulonate kinase [KO:K00880] [EC:2.7.1.53]
Q5A_020900  sgbH; 3-keto-L-gulonate-6-phosphate decarboxylase SgbH [KO:K03078] [EC:4.1.1.85]
Q5A_020905  ulaE; L-ribulose-5-phosphate 3-epimerase UlaE [KO:K03079] [EC:5.1.3.22]
Q5A_013820  araD; L-ribulose-5-phosphate 4-epimerase [KO:K03077] [EC:5.1.3.4]
Q5A_020910  sgbE; L-ribulose-5-phosphate 4-epimerase SgbE [KO:K03077] [EC:5.1.3.4]
Q5A_023955  rpe; Ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
Q5A_011505  araA; L-arabinose isomerase [KO:K01804] [EC:5.3.1.4]
Q5A_011510  araB_1; Ribulokinase [KO:K00853] [EC:2.7.1.16]
Q5A_000280  xylB; Xylulose kinase [KO:K00854] [EC:2.7.1.17]
Q5A_000285  xylA_1; Xylose isomerase [KO:K01805] [EC:5.3.1.5]
Q5A_010315  rhaB; L-Rhamnulokinase [KO:K00848] [EC:2.7.1.5]
Q5A_010325  rhaD; Rhamnulose-1-phosphate aldolase [KO:K01629] [EC:4.1.2.19]
Q5A_004700  hypothetical protein [KO:K09988] [EC:5.3.1.15]
Q5A_009095  Alpha-ketoglutaric semialdehyde dehydrogenase [KO:K13877] [EC:1.2.1.26]
Q5A_024465  araB_2; Ribulokinase [KO:K00875] [EC:2.7.1.47]
Compound
C00022  Pyruvate
C00026  2-Oxoglutarate
C00029  UDP-glucose
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00116  Glycerol
C00167  UDP-glucuronate
C00181  D-Xylose
C00191  D-Glucuronate
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00216  D-Arabinose
C00231  D-Xylulose 5-phosphate
C00259  L-Arabinose
C00266  Glycolaldehyde
C00309  D-Ribulose
C00310  D-Xylulose
C00312  L-Xylulose
C00333  D-Galacturonate
C00379  Xylitol
C00433  2,5-Dioxopentanoate
C00470  Pectate
C00474  Ribitol
C00476  D-Lyxose
C00502  D-Xylonate
C00508  L-Ribulose
C00514  D-Mannonate
C00532  L-Arabitol
C00558  D-Tagaturonate
C00618  3-Dehydro-L-gulonate
C00714  Pectin
C00789  CDP-ribitol
C00800  L-Gulonate
C00817  D-Altronate
C00905  D-Fructuronate
C01068  D-Ribitol 5-phosphate
C01101  L-Ribulose 5-phosphate
C01508  L-Lyxose
C01904  D-Arabitol
C02266  D-Xylonolactone
C02273  Digalacturonate
C02426  L-Glyceraldehyde
C02753  D-Xylono-1,4-lactone
C03033  beta-D-Glucuronoside
C03291  L-Xylulose 5-phosphate
C03826  2-Dehydro-3-deoxy-D-xylonate
C04053  5-Dehydro-4-deoxy-D-glucuronate
C04349  (4S)-4,6-Dihydroxy-2,5-dioxohexanoate
C04575  (4R,5S)-4,5,6-Trihydroxy-2,3-dioxohexanoate
C05385  D-Glucuronate 1-phosphate
C05411  L-Xylonate
C05412  L-Lyxonate
C06118  4-(4-Deoxy-alpha-D-gluc-4-enuronosyl)-D-galacturonate
C06441  L-Xylulose 1-phosphate
C14899  3-Dehydro-L-gulonate 6-phosphate
C15930  L-Galactonate
C20680  2-Dehydro-3-deoxy-L-galactonate
C22337  D-Ribulose 1-phosphate
C22712  4-Deoxy-L-threo-hex-4-enopyranuronate
Reference
  Authors
Yew WS, Gerlt JA.
  Title
Utilization of L-ascorbate by Escherichia coli K-12: assignments of functions to products of the yjf-sga and yia-sgb operons.
  Journal
J Bacteriol 184:302-6 (2002)
DOI:10.1128/JB.184.1.302-306.2002
Reference
  Authors
Yew WS, Akana J, Wise EL, Rayment I, Gerlt JA
  Title
Evolution of enzymatic activities in the orotidine 5'-monophosphate decarboxylase suprafamily: enhancing the promiscuous D-arabino-hex-3-ulose 6-phosphate synthase reaction catalyzed by 3-keto-L-gulonate 6-phosphate decarboxylase.
  Journal
Biochemistry 44:1807-15 (2005)
DOI:10.1021/bi047815v
Reference
  Authors
Yasueda H, Kawahara Y, Sugimoto S.
  Title
Bacillus subtilis yckG and yckF encode two key enzymes of the ribulose monophosphate pathway used by methylotrophs, and yckH is required for their expression.
  Journal
J Bacteriol 181:7154-60 (1999)
DOI:10.1128/JB.181.23.7154-7160.1999
Reference
  Authors
Ibanez E, Gimenez R, Pedraza T, Baldoma L, Aguilar J, Badia J
  Title
Role of the yiaR and yiaS genes of Escherichia coli in metabolism of endogenously formed L-xylulose.
  Journal
J Bacteriol 182:4625-7 (2000)
DOI:10.1128/JB.182.16.4625-4627.2000
Reference
  Authors
Orita I, Yurimoto H, Hirai R, Kawarabayasi Y, Sakai Y, Kato N
  Title
The archaeon Pyrococcus horikoshii possesses a bifunctional enzyme for formaldehyde fixation via the ribulose monophosphate pathway.
  Journal
J Bacteriol 187:3636-42 (2005)
DOI:10.1128/JB.187.11.3636-3642.2005
Related
pathway
sply00010  Glycolysis / Gluconeogenesis
sply00020  Citrate cycle (TCA cycle)
sply00030  Pentose phosphate pathway
sply00052  Galactose metabolism
sply00053  Ascorbate and aldarate metabolism
sply00500  Starch and sucrose metabolism
sply00520  Amino sugar and nucleotide sugar metabolism
sply00561  Glycerolipid metabolism
sply00562  Inositol phosphate metabolism
sply00740  Riboflavin metabolism
KO pathway
ko00040   
LinkDB

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