KEGG   PATHWAY: spse00240
Entry
spse00240                   Pathway                                
Name
Pyrimidine metabolism - Pseudosulfitobacter pseudonitzschiae
Class
Metabolism; Nucleotide metabolism
Pathway map
spse00240  Pyrimidine metabolism
spse00240

Module
spse_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:spse00240]
spse_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:spse00240]
spse_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:spse00240]
spse_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:spse00240]
Other DBs
GO: 0006220 0006213
Organism
Pseudosulfitobacter pseudonitzschiae [GN:spse]
Gene
SULPSESMR1_02366  carB; carbamoyl-phosphate synthase large chain [KO:K01955] [EC:6.3.5.5]
SULPSESMR1_00872  carA; carbamoyl-phosphate synthase small chain [KO:K01956] [EC:6.3.5.5]
SULPSESMR1_02482  pyrB; aspartate carbamoyltransferase [KO:K00609] [EC:2.1.3.2]
SULPSESMR1_02485  pyrC; dihydroorotase [KO:K01465] [EC:3.5.2.3]
SULPSESMR1_01812  pyrC; dihydroorotase [KO:K01465] [EC:3.5.2.3]
SULPSESMR1_02332  pyrD; dihydroorotate dehydrogenase (quinone) [KO:K00254] [EC:1.3.5.2]
SULPSESMR1_01813  pyrE; orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
SULPSESMR1_00218  pyrF; orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
SULPSESMR1_02852  pyrF; orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
SULPSESMR1_01712  pyrH; uridylate kinase [KO:K09903] [EC:2.7.4.22]
SULPSESMR1_01329  ndk; nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
SULPSESMR1_01309  mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
SULPSESMR1_03189  maf; septum formation protein Maf [KO:K06287] [EC:3.6.1.-]
SULPSESMR1_00466  yhdE; Maf-like protein YhdE [KO:K06287] [EC:3.6.1.-]
SULPSESMR1_00813  pyrG; CTP synthase [KO:K01937] [EC:6.3.4.2]
SULPSESMR1_02287  cmk; cytidylate kinase [KO:K00945] [EC:2.7.4.25]
SULPSESMR1_02329  yfkN; trifunctional nucleotide phosphoesterase protein YfkN [KO:K11751] [EC:3.1.3.5 3.6.1.45]
SULPSESMR1_01826  surE; 5'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
SULPSESMR1_02352  upp; uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
SULPSESMR1_01076  yfkN; trifunctional nucleotide phosphoesterase protein YfkN [KO:K01119] [EC:3.1.4.16 3.1.3.6]
SULPSESMR1_02775  yfkN; trifunctional nucleotide phosphoesterase protein YfkN [KO:K01119] [EC:3.1.4.16 3.1.3.6]
SULPSESMR1_00635  YmdB-like protein [KO:K09769] [EC:3.1.4.16]
SULPSESMR1_01606  psuG; pseudouridine-5'-phosphate glycosidase [KO:K16329] [EC:4.2.1.70]
SULPSESMR1_02355  cdd; cytidine deaminase [KO:K01489] [EC:3.5.4.5]
SULPSESMR1_03984  codAch2; pterin deaminase [KO:K01485] [EC:3.5.4.1 3.5.4.21]
SULPSESMR1_01279  2'-deoxycytidine 5'-triphosphate deaminase [KO:K01494] [EC:3.5.4.13]
SULPSESMR1_00326  nrdZ; vitamin B12-dependent ribonucleoside-diphosphate reductase [KO:K00525] [EC:1.17.4.1]
SULPSESMR1_01764  nrdJ; vitamin B12-dependent ribonucleotide reductase [KO:K00525] [EC:1.17.4.1]
SULPSESMR1_04909  nrdE2; ribonucleoside-diphosphate reductase subunit alpha 2 [KO:K00525] [EC:1.17.4.1]
SULPSESMR1_04910  nrdF2; ribonucleoside-diphosphate reductase subunit beta nrdF2 [KO:K00526] [EC:1.17.4.1]
SULPSESMR1_03217  metal-dependent phosphohydrolase [KO:K06952] [EC:3.1.3.89]
SULPSESMR1_00885  tmk; thymidylate kinase [KO:K00943] [EC:2.7.4.9]
SULPSESMR1_00062  dut; deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
SULPSESMR1_02354  deoA; thymidine phosphorylase [KO:K00758] [EC:2.4.2.4]
SULPSESMR1_02373  tdk; thymidine kinase [KO:K00857] [EC:2.7.1.21]
SULPSESMR1_04396  thyA2; thymidylate synthase 2 [KO:K00560] [EC:2.1.1.45]
SULPSESMR1_00778  thyX; thymidylate synthase ThyX [KO:K03465] [EC:2.1.1.148]
SULPSESMR1_00093  preT; NAD-dependent dihydropyrimidine dehydrogenase subunit PreT [KO:K17722] [EC:1.3.1.1]
SULPSESMR1_00094  preA; NAD-dependent dihydropyrimidine dehydrogenase subunit PreA [KO:K17723] [EC:1.3.1.1]
SULPSESMR1_00098  dht; D-hydantoinase/dihydropyrimidinase [KO:K01464] [EC:3.5.2.2]
SULPSESMR1_00096  amaB; N-carbamoyl-L-amino acid hydrolase [KO:K06016] [EC:3.5.1.6 3.5.1.87]
SULPSESMR1_02877  amaB; N-carbamoyl-L-amino acid hydrolase [KO:K06016] [EC:3.5.1.6 3.5.1.87]
SULPSESMR1_04430  putative hydrolase [KO:K06016] [EC:3.5.1.6 3.5.1.87]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
spse00030  Pentose phosphate pathway
spse00220  Arginine biosynthesis
spse00250  Alanine, aspartate and glutamate metabolism
spse00280  Valine, leucine and isoleucine degradation
spse00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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