KEGG   PATHWAY: srhi00010
Entry
srhi00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Sphingomonas rhizophila
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
srhi00010  Glycolysis / Gluconeogenesis
srhi00010

Module
srhi_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:srhi00010]
Other DBs
GO: 0006096 0006094
Organism
Sphingomonas rhizophila [GN:srhi]
Gene
H9L12_02305  glucokinase [KO:K00845] [EC:2.7.1.2]
H9L12_06815  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
H9L12_07885  pyrophosphate--fructose-6-phosphate 1-phosphotransferase [KO:K00895] [EC:2.7.1.90]
H9L12_00440  glpX; class II fructose-bisphosphatase [KO:K11532] [EC:3.1.3.11 3.1.3.37]
H9L12_05945  fructose bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
H9L12_05715  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
H9L12_05955  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
H9L12_12520  gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
H9L12_04715  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
H9L12_00115  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
H9L12_04725  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
H9L12_04730  pyruvate dehydrogenase complex E1 component subunit beta [KO:K00162] [EC:1.2.4.1]
H9L12_08630  pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
H9L12_08615  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
H9L12_08760  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
H9L12_02425  2-oxoacid:acceptor oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
H9L12_02430  2-oxoacid:ferredoxin oxidoreductase subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
H9L12_00195  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
H9L12_01655  NAD(P)-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
H9L12_00405  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
H9L12_05580  phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
srhi00020  Citrate cycle (TCA cycle)
srhi00030  Pentose phosphate pathway
srhi00500  Starch and sucrose metabolism
srhi00620  Pyruvate metabolism
srhi00640  Propanoate metabolism
srhi00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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