KEGG   PATHWAY: stom00010
Entry
stom00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Stomatobaculum sp. F0698
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
stom00010  Glycolysis / Gluconeogenesis
stom00010

Module
stom_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:stom00010]
stom_M00002  Glycolysis, core module involving three-carbon compounds [PATH:stom00010]
stom_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:stom00010]
stom_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:stom00010]
Other DBs
GO: 0006096 0006094
Organism
Stomatobaculum sp. F0698 [GN:stom]
Gene
QU660_08920  ROK family glucokinase [KO:K25026] [EC:2.7.1.2]
QU660_09640  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
QU660_02585  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
QU660_05715  6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
QU660_08885  ATP-dependent 6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
QU660_06045  fructose-1,6-bisphosphatase [KO:K04041] [EC:3.1.3.11]
QU660_03720  class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
QU660_00285  fba; class II fructose-1,6-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
QU660_08225  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
QU660_08235  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
QU660_08230  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
QU660_06030  gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
QU660_05785  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
QU660_05645  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
QU660_01805  ppdK; pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
QU660_00270  PEP/pyruvate-binding domain-containing protein [KO:K01007] [EC:2.7.9.2]
QU660_04110  nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
QU660_00755  L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
QU660_03185  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
QU660_05610  aldose epimerase family protein [KO:K01785] [EC:5.1.3.3]
QU660_00185  phospho-sugar mutase [KO:K01835] [EC:5.4.2.2]
QU660_05065  pckA; phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
stom00020  Citrate cycle (TCA cycle)
stom00030  Pentose phosphate pathway
stom00500  Starch and sucrose metabolism
stom00620  Pyruvate metabolism
stom00640  Propanoate metabolism
stom00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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