KEGG   PATHWAY: sulz00970
Entry
sulz00970                   Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Sulfitobacter sp. SK012
Class
Genetic Information Processing; Translation
Pathway map
sulz00970  Aminoacyl-tRNA biosynthesis
sulz00970

Organism
Sulfitobacter sp. SK012 [GN:sulz]
Gene
C1J03_20725  tRNA-Ala [KO:K14218]
C1J03_02190  tRNA-Ala [KO:K14218]
C1J03_19965  tRNA-Arg [KO:K14219]
C1J03_03520  tRNA-Arg [KO:K14219]
C1J03_11540  tRNA-Arg [KO:K14219]
C1J03_21805  tRNA-Arg [KO:K14219]
C1J03_10330  tRNA-Asn [KO:K14220]
C1J03_13395  tRNA-Asp [KO:K14221]
C1J03_13550  tRNA-Asp [KO:K14221]
C1J03_07295  tRNA-Cys [KO:K14222]
C1J03_18585  tRNA-Gln [KO:K14223]
C1J03_07790  tRNA-Glu [KO:K14224]
C1J03_16840  tRNA-Gly [KO:K14225]
C1J03_08190  tRNA-Gly [KO:K14225]
C1J03_11690  tRNA-Gly [KO:K14225]
C1J03_07970  tRNA-His [KO:K14226]
C1J03_20730  tRNA-Ile [KO:K14227]
C1J03_15835  tRNA-Leu [KO:K14228]
C1J03_15165  tRNA-Leu [KO:K14228]
C1J03_22625  tRNA-Leu [KO:K14228]
C1J03_07435  tRNA-Leu [KO:K14228]
C1J03_13145  tRNA-Leu [KO:K14228]
C1J03_22405  tRNA-Lys [KO:K14229]
C1J03_02505  tRNA-Met [KO:K14230]
C1J03_10485  tRNA-Met [KO:K14230]
C1J03_20705  tRNA-Met [KO:K14230]
C1J03_17835  tRNA-Phe [KO:K14231]
C1J03_09150  tRNA-Pro [KO:K14232]
C1J03_09365  tRNA-Pro [KO:K14232]
C1J03_05330  tRNA-Ser [KO:K14233]
C1J03_10735  tRNA-Ser [KO:K14233]
C1J03_11200  tRNA-Ser [KO:K14233]
C1J03_11845  tRNA-Ser [KO:K14233]
C1J03_14430  tRNA-Thr [KO:K14234]
C1J03_19855  tRNA-Thr [KO:K14234]
C1J03_03020  tRNA-Trp [KO:K14235]
C1J03_13570  tRNA-Val [KO:K14237]
C1J03_13585  tRNA-Val [KO:K14237]
C1J03_20795  tRNA-Val [KO:K14237]
C1J03_09050  glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
C1J03_20220  glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
C1J03_16720  gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
C1J03_01965  amidase [KO:K02433] [EC:6.3.5.6 6.3.5.7]
C1J03_08400  gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit B [KO:K02434] [EC:6.3.5.6 6.3.5.7]
C1J03_16725  Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit C [KO:K02435] [EC:6.3.5.6 6.3.5.7]
C1J03_11645  alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
C1J03_20480  aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
C1J03_15960  glycine--tRNA ligase subunit alpha [KO:K01878] [EC:6.1.1.14]
C1J03_15950  glycine--tRNA ligase subunit beta [KO:K01879] [EC:6.1.1.14]
C1J03_16290  threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
C1J03_15310  serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
C1J03_09250  cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
C1J03_07595  methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
C1J03_02770  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
C1J03_07370  valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
C1J03_01905  leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
C1J03_06305  isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
C1J03_20055  lysine--tRNA ligase [KO:K04566] [EC:6.1.1.6]
C1J03_09330  arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
C1J03_16465  proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
C1J03_18440  histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
C1J03_02290  phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
C1J03_02310  phenylalanine--tRNA ligase subunit beta [KO:K01890] [EC:6.1.1.20]
C1J03_09425  tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
C1J03_20420  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
sulz00250  Alanine, aspartate and glutamate metabolism
sulz00260  Glycine, serine and threonine metabolism
sulz00270  Cysteine and methionine metabolism
sulz00290  Valine, leucine and isoleucine biosynthesis
sulz00300  Lysine biosynthesis
sulz00330  Arginine and proline metabolism
sulz00340  Histidine metabolism
sulz00380  Tryptophan metabolism
sulz00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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