KEGG   PATHWAY: supe00630
Entry
supe00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Superficieibacter sp. HKU1
Class
Metabolism; Carbohydrate metabolism
Pathway map
supe00630  Glyoxylate and dicarboxylate metabolism
supe00630

Module
supe_M00012  Glyoxylate cycle [PATH:supe00630]
supe_M00621  Glycine cleavage system [PATH:supe00630]
Other DBs
GO: 0046487 0043648
Organism
Superficieibacter sp. HKU1 [GN:supe]
Gene
P0H77_21405  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
P0H77_21010  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
P0H77_21410  aceB; malate synthase A [KO:K01638] [EC:2.3.3.9]
P0H77_02835  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
P0H77_07645  citrate synthase [KO:K01647] [EC:2.3.3.1]
P0H77_10110  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
P0H77_04770  acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
P0H77_17540  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
P0H77_09975  katE; catalase HPII [KO:K03781] [EC:1.11.1.6]
P0H77_14705  katA; catalase KatA [KO:K03781] [EC:1.11.1.6]
P0H77_09205  ghrA; glyoxylate/hydroxypyruvate reductase GhrA [KO:K12972] [EC:1.1.1.79 1.1.1.81]
P0H77_17055  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
P0H77_01225  ghrB; glyoxylate/hydroxypyruvate reductase GhrB [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
P0H77_02075  gph; phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
P0H77_22820  glnA; glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
P0H77_15910  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
P0H77_17805  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
P0H77_17815  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
P0H77_04755  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
P0H77_17810  gcvH; glycine cleavage system protein GcvH [KO:K02437]
P0H77_19685  garR; 2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
P0H77_17255  glycerate kinase [KO:K00865] [EC:2.7.1.165]
P0H77_19680  garK; glycerate 2-kinase [KO:K00865] [EC:2.7.1.165]
P0H77_10655  aldA; aldehyde dehydrogenase [KO:K07248] [EC:1.2.1.22 1.2.1.21]
P0H77_12855  kdgA; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
P0H77_17645  fdhF; formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
P0H77_22635  fdnG; formate dehydrogenase-N subunit alpha [KO:K00123] [EC:1.17.1.9]
P0H77_22640  fdxH; formate dehydrogenase subunit beta [KO:K00124]
P0H77_22645  fdoI; formate dehydrogenase cytochrome b556 subunit [KO:K00127]
P0H77_12130  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
supe00010  Glycolysis / Gluconeogenesis
supe00020  Citrate cycle (TCA cycle)
supe00030  Pentose phosphate pathway
supe00053  Ascorbate and aldarate metabolism
supe00071  Fatty acid degradation
supe00230  Purine metabolism
supe00250  Alanine, aspartate and glutamate metabolism
supe00260  Glycine, serine and threonine metabolism
supe00620  Pyruvate metabolism
supe00710  Carbon fixation by Calvin cycle
supe00750  Vitamin B6 metabolism
supe00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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