KEGG   PATHWAY: sur00240
Entry
sur00240                    Pathway                                
Name
Pyrimidine metabolism - Stigmatella aurantiaca
Class
Metabolism; Nucleotide metabolism
Pathway map
sur00240  Pyrimidine metabolism
sur00240

Module
sur_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:sur00240]
sur_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:sur00240]
sur_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:sur00240]
sur_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:sur00240]
Other DBs
GO: 0006220 0006213
Organism
Stigmatella aurantiaca [GN:sur]
Gene
STAUR_3858  carB; Carbamoyl-phosphate synthase large chain [KO:K01955] [EC:6.3.5.5]
STAUR_4033  carA; Carbamoyl-phosphate synthase, small subunit [KO:K01956] [EC:6.3.5.5]
STAUR_4031  pyrB; Aspartate carbamoyltransferase [KO:K00609] [EC:2.1.3.2]
STAUR_4032  pyrC; Dihydroorotase, multifunctional complex type [KO:K01465] [EC:3.5.2.3]
STAUR_5058  pyrD; Dihydroorotate oxidase [KO:K00254] [EC:1.3.5.2]
STAUR_5406  pyrE; Orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
STAUR_5732  pyrF; Orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
STAUR_6047  pyrH; Uridylate kinase [KO:K09903] [EC:2.7.4.22]
STAUR_4056  ndk; Nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
STAUR_5591  MazG family protein [KO:K04765] [EC:3.6.1.9]
STAUR_3376  Septum formation protein Maf [KO:K06287] [EC:3.6.1.-]
STAUR_2800  maf; Maf-like protein [KO:K06287] [EC:3.6.1.-]
STAUR_1655  pyrG; CTP synthase [KO:K01937] [EC:6.3.4.2]
STAUR_4501  cmk; Cytidylate kinase [KO:K00945] [EC:2.7.4.25]
STAUR_4622  udk; Uridine kinase [KO:K00876] [EC:2.7.1.48]
STAUR_3936  5'-nucleotidase family protein [KO:K01081] [EC:3.1.3.5]
STAUR_6064  5`-nucleotidase [KO:K01081] [EC:3.1.3.5]
STAUR_3076  5'-nucleotidase family protein [KO:K11751] [EC:3.1.3.5 3.6.1.45]
STAUR_3396  5'-nucleotidase family protein [KO:K11751] [EC:3.1.3.5 3.6.1.45]
STAUR_4806  surE; 5'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
STAUR_5796  5'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
STAUR_0138  upp; Uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
STAUR_4167  2',3'-cyclic-nucleotide 2'-phosphodiesterase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
STAUR_3772  Indigoidine synthase A-like protein [KO:K16329] [EC:4.2.1.70]
STAUR_6371  pdp; Pyrimidine-nucleoside phosphorylase [KO:K00756] [EC:2.4.2.2]
STAUR_6367  cdd; Cytidine deaminase [KO:K01489] [EC:3.5.4.5]
STAUR_5839  nrdA; Ribonucleoside-diphosphate reductase [KO:K00525] [EC:1.17.4.1]
STAUR_5175  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent [KO:K00525] [EC:1.17.4.1]
STAUR_5840  Ribonucleoside-diphosphate reductase, beta subunit [KO:K00526] [EC:1.17.4.1]
STAUR_3325  Deoxynucleoside kinase family protein [KO:K15519] [EC:2.7.1.76 2.7.1.74]
STAUR_3770  Deoxynucleoside kinase family protein [KO:K15519] [EC:2.7.1.76 2.7.1.74]
STAUR_4508  Cytidine and deoxycytidylate deaminase zinc-binding domain protein [KO:K01493] [EC:3.5.4.12]
STAUR_3948  Thymidylate kinase [KO:K00943] [EC:2.7.4.9]
STAUR_3316  thymidylate kinase [KO:K00943] [EC:2.7.4.9]
STAUR_0672  tmk; thymidylate kinase [KO:K00943] [EC:2.7.4.9]
STAUR_6185  dut; DUTP diphosphatase [KO:K01520] [EC:3.6.1.23]
STAUR_5842  tdk; Thymidine kinase [KO:K00857] [EC:2.7.1.21]
STAUR_6608  Thymidylate synthase [KO:K00560] [EC:2.1.1.45]
STAUR_5799  thyA; Thymidylate synthase [KO:K00560] [EC:2.1.1.45]
STAUR_8045  gltB; Glutamate synthase [NADPH] [KO:K17722] [EC:1.3.1.1]
STAUR_8046  yeiA; Dihydropyrimidine dehydrogenase [KO:K17723] [EC:1.3.1.1]
STAUR_8042  hydA; Dihydropyrimidinase [KO:K01464] [EC:3.5.2.2]
STAUR_8043  Beta-alanine synthase [KO:K01431] [EC:3.5.1.6]
STAUR_1393  NADP-dependent l-serine/l-allo-threonine dehydrogenase [KO:K16066] [EC:1.1.1.381 1.1.1.-]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
sur00030  Pentose phosphate pathway
sur00220  Arginine biosynthesis
sur00250  Alanine, aspartate and glutamate metabolism
sur00280  Valine, leucine and isoleucine degradation
sur00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

DBGET integrated database retrieval system