KEGG   PATHWAY: sxo00010
Entry
sxo00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Staphylococcus xylosus C2a
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
sxo00010  Glycolysis / Gluconeogenesis
sxo00010

Module
sxo_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:sxo00010]
sxo_M00002  Glycolysis, core module involving three-carbon compounds [PATH:sxo00010]
sxo_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:sxo00010]
sxo_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:sxo00010]
Other DBs
GO: 0006096 0006094
Organism
Staphylococcus xylosus C2a [GN:sxo]
Gene
SXYL_01308  glkA; Glucokinase [KO:K25026] [EC:2.7.1.2]
SXYL_01960  pgi; Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
SXYL_01169  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
SXYL_00426  fbp; Fructose-1,6-bisphosphatase [KO:K04041] [EC:3.1.3.11]
SXYL_00221  fda; Fructose-bisphosphate aldolase class 1 [KO:K01623] [EC:4.1.2.13]
SXYL_00808  fba; Fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
SXYL_02068  tpiA; Triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
SXYL_02070  gapA1; Glyceraldehyde-3-phosphate dehydrogenase 1 [KO:K00134] [EC:1.2.1.12]
SXYL_01179  gapA2; Glyceraldehyde-3-phosphate dehydrogenase 2 [KO:K00150] [EC:1.2.1.59]
SXYL_02069  pgk; Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
SXYL_02538  Putative phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
SXYL_00514  gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
SXYL_02067  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
SXYL_02066  eno; Enolase [KO:K01689] [EC:4.2.1.11]
SXYL_01170  pyk; Pyruvate kinase [KO:K00873] [EC:2.7.1.40]
SXYL_00207  ppsA; Pyruvate phosphate dikinase [KO:K01006] [EC:2.7.9.1]
SXYL_01842  pdhA; Pyruvate dehydrogenase E1 component alpha subunit [KO:K00161] [EC:1.2.4.1]
SXYL_01841  pdhB; Pyruvate dehydrogenase E1 component subunit beta [KO:K00162] [EC:1.2.4.1]
SXYL_01840  pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex [KO:K00627] [EC:2.3.1.12]
SXYL_01839  pdhD; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
SXYL_01337  lpdA; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
SXYL_01593  2-oxoglutarate ferredoxin oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
SXYL_01592  2-oxoglutarate ferredoxin oxidoreductase subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
SXYL_00276  ldh2; Lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
SXYL_01103  ldh1; L-lactate dehydrogenase 1 [KO:K00016] [EC:1.1.1.27]
SXYL_02583  NADP-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
SXYL_02614  Aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
SXYL_00811  Aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
SXYL_00173  Aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
SXYL_02616  Acetate-CoA ligase [KO:K01895] [EC:6.2.1.1]
SXYL_01132  acsA; Acetate---CoA ligase [KO:K01895] [EC:6.2.1.1]
SXYL_00610  Putative aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
SXYL_01881  pgcA; Phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
SXYL_01083  pckA; Phosphoenolpyruvate carboxykinase [ATP] [KO:K01610] [EC:4.1.1.49]
SXYL_00061  Glycoside hydrolase, family 1 [KO:K01223] [EC:3.2.1.86]
SXYL_00527  bglA; 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
SXYL_01421  crr; Glucose-specific phosphotransferase enzyme IIA component [KO:K02777] [EC:2.7.1.-]
SXYL_00253  PTS system, glucose-specific IIBC component [KO:K02791] [EC:2.7.1.199 2.7.1.208]
SXYL_00369  ptsG; PTS system glucose-specific EIICBA component [KO:K20118] [EC:2.7.1.199]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
sxo00020  Citrate cycle (TCA cycle)
sxo00030  Pentose phosphate pathway
sxo00500  Starch and sucrose metabolism
sxo00620  Pyruvate metabolism
sxo00640  Propanoate metabolism
sxo00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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