KEGG   PATHWAY: sxt00630
Entry
sxt00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Streptomyces xanthophaeus
Class
Metabolism; Carbohydrate metabolism
Pathway map
sxt00630  Glyoxylate and dicarboxylate metabolism
sxt00630

Module
sxt_M00012  Glyoxylate cycle [PATH:sxt00630]
sxt_M00621  Glycine cleavage system [PATH:sxt00630]
sxt_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:sxt00630]
Other DBs
GO: 0046487 0043648
Organism
Streptomyces xanthophaeus [GN:sxt]
Gene
KPP03845_106591  icl1; Isocitrate lyase 1 [KO:K01637] [EC:4.1.3.1]
KPP03845_103588  acsA_2; Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
KPP03845_105880  acsA_3; Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
KPP03845_106592  aceB_2; Malate synthase [KO:K01638] [EC:2.3.3.9]
KPP03845_105900  aceB_1; Malate synthase [KO:K01638] [EC:2.3.3.9]
KPP03845_104612  mdh; Malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
KPP03845_102907  gltA2; Citrate synthase 1 [KO:K01647] [EC:2.3.3.1]
KPP03845_104302  citA_1; Putative citrate synthase 2 [KO:K01647] [EC:2.3.3.1]
KPP03845_105537  citZ; Citrate synthase 2 [KO:K01647] [EC:2.3.3.1]
KPP03845_105538  citA_2; Citrate synthase 1 [KO:K01647] [EC:2.3.3.1]
KPP03845_105671  acnA; Aconitate hydratase A [KO:K01681] [EC:4.2.1.3]
KPP03845_101058  hypothetical protein [KO:K00626] [EC:2.3.1.9]
KPP03845_102241  fadA5_1; Steroid 3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
KPP03845_102562  fadA5_2; Steroid 3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
KPP03845_103183  fadA_1; 3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
KPP03845_105132  putative acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
KPP03845_106105  fadA_2; Putative acyltransferase [KO:K00626] [EC:2.3.1.9]
KPP03845_105131  hypothetical protein [KO:K05606] [EC:5.1.99.1]
KPP03845_105977  mutB_2; Methylmalonyl-CoA mutase large subunit [KO:K14447] [EC:5.4.99.63]
KPP03845_104692  accC; Biotin carboxylase [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
KPP03845_104698  accD5; putative propionyl-CoA carboxylase beta chain 5 [KO:K27094] [EC:6.4.1.3 6.4.1.- 2.1.3.15]
KPP03845_104697  hypothetical protein [KO:K27095]
KPP03845_105612  mutB_1; putative methylmalonyl-CoA mutase large subunit [KO:K01847] [EC:5.4.99.2]
KPP03845_105613  mutA; putative methylmalonyl-CoA mutase small subunit [KO:K01847] [EC:5.4.99.2]
KPP03845_104645  scpA_3; Methylmalonyl-CoA mutase [KO:K01848] [EC:5.4.99.2]
KPP03845_104838  glmE_1; Glutamate mutase epsilon subunit [KO:K19268] [EC:5.4.99.1]
KPP03845_105814  glmE_2; Glutamate mutase epsilon subunit [KO:K19268] [EC:5.4.99.1]
KPP03845_104839  glmS_4; Glutamate mutase sigma subunit [KO:K01846] [EC:5.4.99.1]
KPP03845_105815  glmS_5; Glutamate mutase sigma subunit [KO:K01846] [EC:5.4.99.1]
KPP03845_106933  putative FAD-linked oxidoreductase [KO:K00104] [EC:1.1.99.14]
KPP03845_103049  putative FAD-linked oxidoreductase [KO:K00104] [EC:1.1.99.14]
KPP03845_100068  katE; Catalase HPII [KO:K03781] [EC:1.11.1.6]
KPP03845_104807  katA; Catalase [KO:K03781] [EC:1.11.1.6]
KPP03845_104979  bca_1; Bromoperoxidase-catalase [KO:K03781] [EC:1.11.1.6]
KPP03845_105887  bca_2; Bromoperoxidase-catalase [KO:K03781] [EC:1.11.1.6]
KPP03845_104250  hypothetical protein [KO:K01091] [EC:3.1.3.18]
KPP03845_101849  ipuC; Glutamate--isopropylamine ligase [KO:K01915] [EC:6.3.1.2]
KPP03845_102435  glnA_1; Glutamine synthetase [KO:K01915] [EC:6.3.1.2]
KPP03845_102450  glnB_1; Glutamine synthetase [KO:K01915] [EC:6.3.1.2]
KPP03845_102480  glnA_2; Glutamine synthetase [KO:K01915] [EC:6.3.1.2]
KPP03845_104623  glyA_1; Serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
KPP03845_105101  glyA_2; Serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
KPP03845_105203  glyA2; Serine hydroxymethyltransferase 2 [KO:K00600] [EC:2.1.2.1]
KPP03845_101572  gcvP; putative glycine dehydrogenase (decarboxylating) [KO:K00281] [EC:1.4.4.2]
KPP03845_105205  gcvT_2; Aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
KPP03845_102426  pdhD; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
KPP03845_105204  gcvH; Glycine cleavage system H protein [KO:K02437]
KPP03845_105883  gcl; Glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
KPP03845_105889  hyi; Hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
KPP03845_105888  garR; 2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
KPP03845_105960  garK; Glycerate 2-kinase [KO:K00865] [EC:2.7.1.165]
KPP03845_106481  dmlA; D-malate dehydrogenase [decarboxylating] [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
KPP03845_106725  kdgA; KHG/KDPG aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
KPP03845_105052  kgd; Multifunctional 2-oxoglutarate metabolism enzyme [KO:K01616] [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
KPP03845_103432  purU; Formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
sxt00010  Glycolysis / Gluconeogenesis
sxt00020  Citrate cycle (TCA cycle)
sxt00030  Pentose phosphate pathway
sxt00053  Ascorbate and aldarate metabolism
sxt00071  Fatty acid degradation
sxt00230  Purine metabolism
sxt00250  Alanine, aspartate and glutamate metabolism
sxt00260  Glycine, serine and threonine metabolism
sxt00620  Pyruvate metabolism
sxt00710  Carbon fixation by Calvin cycle
sxt00750  Vitamin B6 metabolism
sxt00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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