KEGG   PATHWAY: synd00010
Entry
synd00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Synechococcus sp. KORDI-52
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
synd00010  Glycolysis / Gluconeogenesis
synd00010

Module
synd_M00002  Glycolysis, core module involving three-carbon compounds [PATH:synd00010]
synd_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:synd00010]
Other DBs
GO: 0006096 0006094
Organism
Synechococcus sp. KORDI-52 [GN:synd]
Gene
KR52_11880  glucokinase [KO:K00845] [EC:2.7.1.2]
KR52_11915  xylose repressor [KO:K25026] [EC:2.7.1.2]
KR52_09590  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
KR52_10420  glpX; fructose 1,6-bisphosphatase [KO:K11532] [EC:3.1.3.11 3.1.3.37]
KR52_07050  fructose-bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
KR52_07055  fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
KR52_07310  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
KR52_02330  gapA; glyceraldehyde-3-phosphate dehydrogenase [KO:K00150] [EC:1.2.1.59]
KR52_03645  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
KR52_05260  phosphoglyceromutase [KO:K15633] [EC:5.4.2.12]
KR52_03530  eno; enolase [KO:K01689] [EC:4.2.1.11]
KR52_09255  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
KR52_12530  pyruvate dehydrogenase E1 subunit alpha [KO:K00161] [EC:1.2.4.1]
KR52_10685  pyruvate dehydrogenase subunit beta [KO:K00162] [EC:1.2.4.1]
KR52_06275  branched-chain alpha-keto acid dehydrogenase subunit E2 [KO:K00627] [EC:2.3.1.12]
KR52_12620  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
KR52_14440  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
KR52_10940  3-hydroxypropionyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
KR52_04685  phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
synd00020  Citrate cycle (TCA cycle)
synd00030  Pentose phosphate pathway
synd00500  Starch and sucrose metabolism
synd00620  Pyruvate metabolism
synd00640  Propanoate metabolism
synd00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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