KEGG   PATHWAY: syny00010
Entry
syny00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Synechococcus sp. SynAce01
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
syny00010  Glycolysis / Gluconeogenesis
syny00010

Module
syny_M00002  Glycolysis, core module involving three-carbon compounds [PATH:syny00010]
syny_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:syny00010]
Other DBs
GO: 0006096 0006094
Organism
Synechococcus sp. SynAce01 [GN:syny]
Gene
BM449_13030  glucokinase [KO:K00845] [EC:2.7.1.2]
BM449_13065  ROK family protein [KO:K25026] [EC:2.7.1.2]
BM449_12635  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
BM449_11030  fructose-bisphosphatase, class II [KO:K11532] [EC:3.1.3.11 3.1.3.37]
BM449_01620  fructose-bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
BM449_01815  fructose-1,6-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
BM449_02500  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
BM449_02200  type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
BM449_07525  type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00150] [EC:1.2.1.59]
BM449_06245  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
BM449_10250  phosphoglycerate mutase (2,3-diphosphoglycerate-independent) [KO:K15633] [EC:5.4.2.12]
BM449_06135  phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
BM449_12450  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
BM449_11960  phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
BM449_11715  pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
BM449_10795  alpha-ketoacid dehydrogenase subunit beta [KO:K00162] [EC:1.2.4.1]
BM449_09945  branched-chain alpha-keto acid dehydrogenase subunit E2 [KO:K00627] [EC:2.3.1.12]
BM449_02810  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
BM449_12050  pyruvate:ferredoxin (flavodoxin) oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
BM449_12640  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
BM449_13200  alcohol dehydrogenase [KO:K12957] [EC:1.1.1.2 1.1.1.183]
BM449_03965  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
BM449_10525  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
BM449_09365  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
syny00020  Citrate cycle (TCA cycle)
syny00030  Pentose phosphate pathway
syny00500  Starch and sucrose metabolism
syny00620  Pyruvate metabolism
syny00640  Propanoate metabolism
syny00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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