KEGG   PATHWAY: syt00010
Entry
syt00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Synechocystis sp. PCC 6803 GT-I
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
syt00010  Glycolysis / Gluconeogenesis
syt00010

Module
syt_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:syt00010]
syt_M00002  Glycolysis, core module involving three-carbon compounds [PATH:syt00010]
syt_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:syt00010]
Other DBs
GO: 0006096 0006094
Organism
Synechocystis sp. PCC 6803 GT-I [GN:syt]
Gene
SYNGTI_2648  glk; glucokinase [KO:K00845] [EC:2.7.1.2]
SYNGTI_2067  xylR; xylose repressor [KO:K25026] [EC:2.7.1.2]
SYNGTI_1593  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
SYNGTI_0269  pfkA; phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
SYNGTI_2806  pfkA; phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
SYNGTI_1844  fbp; fructose 1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
SYNGTI_1412  glpX; fructose 1,6-bisphosphatase II [KO:K11532] [EC:3.1.3.11 3.1.3.37]
SYNGTI_1829  fda; fructose-bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
SYNGTI_2218  fbaA; fructose-1,6-bisphosphate aldolase, class II [KO:K01624] [EC:4.1.2.13]
SYNGTI_2179  tpi; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
SYNGTI_1035  gap1; glyceraldehyde 3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
SYNGTI_2928  gap2; glyceraldehyde-3-phosphate dehydrogenase (NADP+)(phosphorylating) [KO:K00150] [EC:1.2.1.59]
SYNGTI_1949  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
SYNGTI_2039  yibO; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
SYNGTI_3042  eno; enolase [KO:K01689] [EC:4.2.1.11]
SYNGTI_1000  pykF; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
SYNGTI_2658  pykF; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
SYNGTI_2704  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
SYNGTI_2020  slr1934; pyruvate dehydrogenase E1 component, alphasubunit [KO:K00161] [EC:1.2.4.1]
SYNGTI_0871  pdhB; pyruvate dehydrogenase E1 beta subunit [KO:K00162] [EC:1.2.4.1]
SYNGTI_2042  odhB; dihydrolipoamide acetyltransferase component(E2) of pyruvate dehydrogenase complex [KO:K00627] [EC:2.3.1.12]
SYNGTI_0179  phdD; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
SYNGTI_2810  nifJ; pyruvate oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
SYNGTI_0589  sll0990; glutathione-dependent formaldehyde dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
SYNGTI_1828  slr0942; aldehyde reductase [KO:K00002] [EC:1.1.1.2]
SYNGTI_3133  slr1192; zinc-containing alcohol dehydrogenase family [KO:K12957] [EC:1.1.1.2 1.1.1.183]
SYNGTI_2601  slr0091; aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
SYNGTI_2535  acs; acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
SYNGTI_3052  pgm; phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
syt00020  Citrate cycle (TCA cycle)
syt00030  Pentose phosphate pathway
syt00500  Starch and sucrose metabolism
syt00620  Pyruvate metabolism
syt00640  Propanoate metabolism
syt00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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