KEGG   PATHWAY: syx00970
Entry
syx00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Synechococcus sp. WH 7803
Class
Genetic Information Processing; Translation
Pathway map
syx00970  Aminoacyl-tRNA biosynthesis
syx00970

Organism
Synechococcus sp. WH 7803 [GN:syx]
Gene
RNA_18  tRNA-Ala [KO:K14218]
RNA_49  tRNA-Ala [KO:K14218]
RNA_8  tRNA-Ala [KO:K14218]
RNA_32  tRNA-Ala [KO:K14218]
RNA_6  tRNA-Arg [KO:K14219]
RNA_41  tRNA-Arg [KO:K14219]
RNA_4  tRNA-Arg [KO:K14219]
RNA_12  tRNA-Arg [KO:K14219]
RNA_52  tRNA-Asn [KO:K14220]
RNA_39  tRNA-Asp [KO:K14221]
RNA_13  tRNA-Cys [KO:K14222]
RNA_11  tRNA-Gln [KO:K14223]
RNA_31  tRNA-Glu [KO:K14224]
RNA_2  tRNA-Gly [KO:K14225]
RNA_1  tRNA-Gly [KO:K14225]
RNA_42  tRNA-Gly [KO:K14225]
RNA_35  tRNA-His [KO:K14226]
RNA_17  tRNA-Ile [KO:K14227]
RNA_50  tRNA-Ile [KO:K14227]
RNA_7  tRNA-Leu [KO:K14228]
RNA_33  tRNA-Leu [KO:K14228]
RNA_34  tRNA-Leu [KO:K14228]
RNA_46  tRNA-Leu [KO:K14228]
RNA_23  tRNA-Leu [KO:K14228]
RNA_27  tRNA-Lys [KO:K14229]
RNA_29  tRNA-Met [KO:K14230]
RNA_25  tRNA-Met [KO:K14230]
RNA_5  Codon recognized: AUG; tRNA-Pseudo [KO:K14230]
RNA_14  tRNA-Phe [KO:K14231]
RNA_9  tRNA-Pro [KO:K14232]
RNA_28  tRNA-Pro [KO:K14232]
RNA_24  tRNA-Pro [KO:K14232]
RNA_37  tRNA-Ser [KO:K14233]
RNA_30  tRNA-Ser [KO:K14233]
RNA_10  tRNA-Ser [KO:K14233]
RNA_26  tRNA-Ser [KO:K14233]
RNA_44  tRNA-Thr [KO:K14234]
RNA_21  tRNA-Thr [KO:K14234]
RNA_15  tRNA-Thr [KO:K14234]
RNA_38  tRNA-Trp [KO:K14235]
RNA_22  tRNA-Tyr [KO:K14236]
RNA_40  tRNA-Val [KO:K14237]
RNA_43  tRNA-Val [KO:K14237]
RNA_53  tRNA-Val [KO:K14237]
SynWH7803_1836  gltX; Glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
SynWH7803_1066  gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
SynWH7803_2385  gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [KO:K02434] [EC:6.3.5.6 6.3.5.7]
SynWH7803_0338  gatC; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [KO:K02435] [EC:6.3.5.6 6.3.5.7]
SynWH7803_2398  alaS; Alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
SynWH7803_2458  aspS; Aspartyl-tRNA synthetase [KO:K01876] [EC:6.1.1.12]
SynWH7803_1770  glyQ; Glycyl-tRNA synthetase, alpha subunit [KO:K01878] [EC:6.1.1.14]
SynWH7803_1318  glyS; Glycyl-tRNA synthetase beta subunit [KO:K01879] [EC:6.1.1.14]
SynWH7803_0776  thrS; Threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
SynWH7803_1905  serS; Seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
SynWH7803_1618  cysS; Cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
SynWH7803_1128  metG; Methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
SynWH7803_1099  fmt; Methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
SynWH7803_2440  valS; Valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
SynWH7803_1260  leuS; Leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
SynWH7803_0335  ileS; Isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
SynWH7803_0177  lysS; Lysyl-tRNA synthetase [KO:K04567] [EC:6.1.1.6]
SynWH7803_2336  argS; Arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
SynWH7803_0622  proS; Prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
SynWH7803_0243  hisS; Histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
SynWH7803_1712  pheS; Phenylalanyl-tRNA synthetase alpha subunit [KO:K01889] [EC:6.1.1.20]
SynWH7803_1290  pheT; Phenylalanyl-tRNA synthetase beta subunit [KO:K01890] [EC:6.1.1.20]
SynWH7803_1946  tyrS; Tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
SynWH7803_0780  trpS; Tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
syx00250  Alanine, aspartate and glutamate metabolism
syx00260  Glycine, serine and threonine metabolism
syx00270  Cysteine and methionine metabolism
syx00290  Valine, leucine and isoleucine biosynthesis
syx00300  Lysine biosynthesis
syx00330  Arginine and proline metabolism
syx00340  Histidine metabolism
syx00380  Tryptophan metabolism
syx00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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