KEGG   PATHWAY: tbl00020
Entry
tbl00020                    Pathway                                
Name
Citrate cycle (TCA cycle) - Henningerozyma blattae
Description
The citrate cycle (TCA cycle, Krebs cycle) is an important aerobic pathway for the final steps of the oxidation of carbohydrates and fatty acids. The cycle starts with acetyl-CoA, the activated form of acetate, derived from glycolysis and pyruvate oxidation for carbohydrates and from beta oxidation of fatty acids. The two-carbon acetyl group in acetyl-CoA is transferred to the four-carbon compound of oxaloacetate to form the six-carbon compound of citrate. In a series of reactions two carbons in citrate are oxidized to CO2 and the reaction pathway supplies NADH for use in the oxidative phosphorylation and other metabolic processes. The pathway also supplies important precursor metabolites including 2-oxoglutarate. At the end of the cycle the remaining four-carbon part is transformed back to oxaloacetate. According to the genome sequence data, many organisms seem to lack genes for the full cycle [MD:M00009], but contain genes for specific segments [MD:M00010 M00011].
Class
Metabolism; Carbohydrate metabolism
Pathway map
tbl00020  Citrate cycle (TCA cycle)
tbl00020

Module
tbl_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:tbl00020]
tbl_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:tbl00020]
tbl_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:tbl00020]
tbl_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:tbl00020]
tbl_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:tbl00020]
Other DBs
GO: 0006099
Organism
Henningerozyma blattae [GN:tbl]
Gene
TBLA_0C05230  TBLA0C05230; hypothetical protein [KO:K01647] [EC:2.3.3.1]
TBLA_0D04320  TBLA0D04320; hypothetical protein [KO:K01647] [EC:2.3.3.1]
TBLA_0B09940  TBLA0B09940; hypothetical protein [KO:K01681] [EC:4.2.1.3]
TBLA_0A08010  TBLA0A08010; hypothetical protein [KO:K00031] [EC:1.1.1.42]
TBLA_0C01290  TBLA0C01290; hypothetical protein [KO:K00031] [EC:1.1.1.42]
TBLA_0B02240  TBLA0B02240; hypothetical protein [KO:K00030] [EC:1.1.1.41]
TBLA_0B06910  TBLA0B06910; hypothetical protein [KO:K00030] [EC:1.1.1.41]
TBLA_0E03770  TBLA0E03770; hypothetical protein [KO:K00164] [EC:1.2.4.2]
TBLA_0H01250  TBLA0H01250; hypothetical protein [KO:K00658] [EC:2.3.1.61]
TBLA_0D02570  TBLA0D02570; hypothetical protein [KO:K00382] [EC:1.8.1.4]
TBLA_0B02220  TBLA0B02220; hypothetical protein [KO:K01899] [EC:6.2.1.4 6.2.1.5]
TBLA_0C06560  TBLA0C06560; hypothetical protein [KO:K01900] [EC:6.2.1.4 6.2.1.5]
TBLA_0A10080  TBLA0A10080; hypothetical protein [KO:K00234] [EC:1.3.5.1]
TBLA_0E01400  TBLA0E01400; hypothetical protein [KO:K00235] [EC:1.3.5.1]
TBLA_0H00360  TBLA0H00360; hypothetical protein [KO:K00236]
TBLA_0H01000  TBLA0H01000; hypothetical protein [KO:K00237]
TBLA_0G01000  TBLA0G01000; hypothetical protein [KO:K01679] [EC:4.2.1.2]
TBLA_0A07130  TBLA0A07130; hypothetical protein [KO:K01679] [EC:4.2.1.2]
TBLA_0B08630  TBLA0B08630; hypothetical protein [KO:K00026] [EC:1.1.1.37]
TBLA_0B09220  TBLA0B09220; hypothetical protein [KO:K00026] [EC:1.1.1.37]
TBLA_0C00860  TBLA0C00860; hypothetical protein [KO:K00026] [EC:1.1.1.37]
TBLA_0A07800  TBLA0A07800; hypothetical protein [KO:K00026] [EC:1.1.1.37]
TBLA_0F02480  TBLA0F02480; hypothetical protein [KO:K01958] [EC:6.4.1.1]
TBLA_0A09990  TBLA0A09990; hypothetical protein [KO:K01958] [EC:6.4.1.1]
TBLA_0E01700  TBLA0E01700; hypothetical protein [KO:K01610] [EC:4.1.1.49]
TBLA_0F03900  TBLA0F03900; hypothetical protein [KO:K00161] [EC:1.2.4.1]
TBLA_0A10000  TBLA0A10000; hypothetical protein [KO:K00162] [EC:1.2.4.1]
TBLA_0G02660  TBLA0G02660; hypothetical protein [KO:K00627] [EC:2.3.1.12]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00026  2-Oxoglutarate
C00036  Oxaloacetate
C00042  Succinate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00091  Succinyl-CoA
C00122  Fumarate
C00149  (S)-Malate
C00158  Citrate
C00311  Isocitrate
C00417  cis-Aconitate
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C05379  Oxalosuccinate
C05381  3-Carboxy-1-hydroxypropyl-ThPP
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16254  [Dihydrolipoyllysine-residue succinyltransferase] S-succinyldihydrolipoyllysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
tbl00010  Glycolysis / Gluconeogenesis
tbl00053  Ascorbate and aldarate metabolism
tbl00061  Fatty acid biosynthesis
tbl00062  Fatty acid elongation
tbl00071  Fatty acid degradation
tbl00190  Oxidative phosphorylation
tbl00220  Arginine biosynthesis
tbl00250  Alanine, aspartate and glutamate metabolism
tbl00280  Valine, leucine and isoleucine degradation
tbl00350  Tyrosine metabolism
tbl00630  Glyoxylate and dicarboxylate metabolism
KO pathway
ko00020   
LinkDB

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