KEGG   PATHWAY: thin00970
Entry
thin00970                   Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Candidatus Thioglobus sp. NP1
Class
Genetic Information Processing; Translation
Pathway map
thin00970  Aminoacyl-tRNA biosynthesis
thin00970

Organism
Candidatus Thioglobus sp. NP1 [GN:thin]
Gene
CRN91_03925  tRNA-Ala [KO:K14218]
CRN91_02335  tRNA-Ala [KO:K14218]
CRN91_07160  tRNA-Arg [KO:K14219]
CRN91_05845  tRNA-Arg [KO:K14219]
CRN91_06810  tRNA-Arg [KO:K14219]
CRN91_00225  tRNA-Arg [KO:K14219]
CRN91_07045  tRNA-Asn [KO:K14220]
CRN91_04415  tRNA-Asp [KO:K14221]
CRN91_00240  tRNA-Cys [KO:K14222]
CRN91_00615  tRNA-Gln [KO:K14223]
CRN91_03930  tRNA-Glu [KO:K14224]
CRN91_03935  tRNA-Glu [KO:K14224]
CRN91_07895  tRNA-Gly [KO:K14225]
CRN91_00235  tRNA-Gly [KO:K14225]
CRN91_07165  tRNA-His [KO:K14226]
CRN91_02330  tRNA-Ile [KO:K14227]
CRN91_01360  tRNA-Leu [KO:K14228]
CRN91_08045  tRNA-Leu [KO:K14228]
CRN91_02965  tRNA-Leu [KO:K14228]
CRN91_03610  tRNA-Leu [KO:K14228]
CRN91_04925  tRNA-Lys [KO:K14229]
CRN91_00635  tRNA-Met [KO:K14230]
CRN91_01685  tRNA-Met [KO:K14230]
CRN91_01760  tRNA-Met [KO:K14230]
CRN91_01640  tRNA-Phe [KO:K14231]
CRN91_07155  tRNA-Pro [KO:K14232]
CRN91_02515  tRNA-Ser [KO:K14233]
CRN91_03710  tRNA-Ser [KO:K14233]
CRN91_05550  tRNA-Ser [KO:K14233]
CRN91_07890  tRNA-Thr [KO:K14234]
CRN91_01565  tRNA-Thr [KO:K14234]
CRN91_07880  tRNA-Trp [KO:K14235]
CRN91_07900  tRNA-Tyr [KO:K14236]
CRN91_06790  tRNA-Val [KO:K14237]
CRN91_04410  tRNA-Val [KO:K14237]
CRN91_06465  glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
CRN91_04075  Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A [KO:K02433] [EC:6.3.5.6 6.3.5.7]
CRN91_04080  Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit B [KO:K02434] [EC:6.3.5.6 6.3.5.7]
CRN91_04070  Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit C [KO:K02435] [EC:6.3.5.6 6.3.5.7]
CRN91_03080  glutamine--tRNA ligase [KO:K01886] [EC:6.1.1.18]
CRN91_03515  alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
CRN91_07210  aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
CRN91_07470  glyQ; glycine--tRNA ligase subunit alpha [KO:K01878] [EC:6.1.1.14]
CRN91_07395  glycine--tRNA ligase subunit beta [KO:K01879] [EC:6.1.1.14]
CRN91_04555  threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
CRN91_02365  serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
CRN91_00715  cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
CRN91_05545  methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
CRN91_07735  methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
CRN91_06510  valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
CRN91_01400  leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
CRN91_04060  isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
CRN91_04905  lysS; lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
CRN91_02180  arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
CRN91_04095  proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
CRN91_04335  histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
CRN91_04575  phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
CRN91_04580  phenylalanine--tRNA ligase subunit beta [KO:K01890] [EC:6.1.1.20]
CRN91_00385  tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
CRN91_04050  tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
thin00250  Alanine, aspartate and glutamate metabolism
thin00260  Glycine, serine and threonine metabolism
thin00270  Cysteine and methionine metabolism
thin00290  Valine, leucine and isoleucine biosynthesis
thin00300  Lysine biosynthesis
thin00330  Arginine and proline metabolism
thin00340  Histidine metabolism
thin00380  Tryptophan metabolism
thin00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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