KEGG   PATHWAY: tid00010
Entry
tid00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Thermodesulfatator indicus
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
tid00010  Glycolysis / Gluconeogenesis
tid00010

Module
tid_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:tid00010]
Other DBs
GO: 0006096 0006094
Organism
Thermodesulfatator indicus [GN:tid]
Gene
Thein_0091  glucokinase [KO:K00845] [EC:2.7.1.2]
Thein_0049  phosphoglucose isomerase (PGI) [KO:K01810] [EC:5.3.1.9]
Thein_0888  phosphofructokinase [KO:K00850] [EC:2.7.1.11]
Thein_1559  ketose-bisphosphate aldolase class-II [KO:K01624] [EC:4.1.2.13]
Thein_1892  protein of unknown function DUF100 [KO:K01622] [EC:4.1.2.13 3.1.3.11]
Thein_1412  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
Thein_1408  glyceraldehyde-3-phosphate dehydrogenase, type I [KO:K00134] [EC:1.2.1.12]
Thein_1410  Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) [KO:K00134] [EC:1.2.1.12]
Thein_1411  Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
Thein_1014  phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent [KO:K15633] [EC:5.4.2.12]
Thein_0200  proposed homoserine kinase [KO:K15635] [EC:5.4.2.12]
Thein_2014  phosphonopyruvate decarboxylase-related protein [KO:K15635] [EC:5.4.2.12]
Thein_2170  enolase [KO:K01689] [EC:4.2.1.11]
Thein_1409  pyruvate phosphate dikinase PEP/pyruvate-binding protein [KO:K01006] [EC:2.7.9.1]
Thein_0024  phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
Thein_2065  pyruvate phosphate dikinase PEP/pyruvate-binding protein [KO:K01007] [EC:2.7.9.2]
Thein_1420  pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [KO:K00169] [EC:1.2.7.1]
Thein_1421  thiamine pyrophosphate TPP-binding domain-containing protein [KO:K00170] [EC:1.2.7.1]
Thein_1418  pyruvate/ketoisovalerate oxidoreductase, gamma subunit [KO:K00172] [EC:1.2.7.1]
Thein_1419  pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [KO:K00171] [EC:1.2.7.1]
Thein_1244  acetate/CoA ligase [KO:K01895] [EC:6.2.1.1]
Thein_0153  acetate/CoA ligase [KO:K01895] [EC:6.2.1.1]
Thein_0353  CoA-binding domain protein [KO:K24012] [EC:6.2.1.13]
Thein_2165  phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I [KO:K15778] [EC:5.4.2.8 5.4.2.2]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
tid00020  Citrate cycle (TCA cycle)
tid00030  Pentose phosphate pathway
tid00500  Starch and sucrose metabolism
tid00620  Pyruvate metabolism
tid00640  Propanoate metabolism
tid00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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