KEGG   PATHWAY: toc00010
Entry
toc00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Thermosediminibacter oceani
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
toc00010  Glycolysis / Gluconeogenesis
toc00010

Module
toc_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:toc00010]
toc_M00002  Glycolysis, core module involving three-carbon compounds [PATH:toc00010]
toc_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:toc00010]
toc_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:toc00010]
Other DBs
GO: 0006096 0006094
Organism
Thermosediminibacter oceani [GN:toc]
Gene
Toce_1809  glucokinase, ROK family [KO:K25026] [EC:2.7.1.2]
Toce_0846  bifunctional phosphoglucose/phosphomannose isomerase [KO:K15916] [EC:5.3.1.9 5.3.1.8]
Toce_0870  6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
Toce_1875  ketose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
Toce_1810  fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
Toce_0360  fructose-bisphosphate aldolase; D-fructose 1,6-bisphosphatase [KO:K01622] [EC:4.1.2.13 3.1.3.11]
Toce_1852  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
Toce_1855  glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
Toce_2092  glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
Toce_1853  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
Toce_1851  phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
Toce_1850  enolase [KO:K01689] [EC:4.2.1.11]
Toce_0871  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
Toce_0928  pyruvate phosphate dikinase [KO:K01006] [EC:2.7.9.1]
Toce_2028  catalytic domain of components of various dehydrogenase complexes [KO:K00627] [EC:2.3.1.12]
Toce_1430  catalytic domain of components of various dehydrogenase complexes [KO:K00627] [EC:2.3.1.12]
Toce_0808  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Toce_2027  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Toce_1429  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Toce_2139  pyruvate ferredoxin oxidoreductase, alpha subunit [KO:K00169] [EC:1.2.7.1]
Toce_2138  thiamine pyrophosphate protein domain protein TPP-binding protein [KO:K00170] [EC:1.2.7.1]
Toce_2141  pyruvate ferredoxin oxidoreductase, gamma subunit [KO:K00172] [EC:1.2.7.1]
Toce_2140  pyruvate ferredoxin oxidoreductase, delta subunit [KO:K00171] [EC:1.2.7.1]
Toce_0834  pyruvate flavodoxin/ferredoxin oxidoreductase domain protein [KO:K00174] [EC:1.2.7.3 1.2.7.11]
Toce_1204  2-oxoglutarate ferredoxin oxidoreductase, alpha subunit [KO:K00174] [EC:1.2.7.3 1.2.7.11]
Toce_0835  thiamine pyrophosphate protein domain protein TPP-binding protein [KO:K00175] [EC:1.2.7.3 1.2.7.11]
Toce_1203  2-oxoglutarate ferredoxin oxidoreductase, beta subunit [KO:K00175] [EC:1.2.7.3 1.2.7.11]
Toce_1441  L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
Toce_0214  iron-containing alcohol dehydrogenase [KO:K00001] [EC:1.1.1.1]
Toce_0825  phosphomannomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
Toce_0101  phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
Toce_0345  6-phospho-beta-glucosidase [KO:K01222] [EC:3.2.1.86]
Toce_1700  glycoside hydrolase family 4 [KO:K01222] [EC:3.2.1.86]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
toc00020  Citrate cycle (TCA cycle)
toc00030  Pentose phosphate pathway
toc00500  Starch and sucrose metabolism
toc00620  Pyruvate metabolism
toc00640  Propanoate metabolism
toc00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

DBGET integrated database retrieval system