KEGG   PATHWAY: top00010
Entry
top00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Thermodesulfobacterium geofontis
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
top00010  Glycolysis / Gluconeogenesis
top00010

Module
top_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:top00010]
top_M00002  Glycolysis, core module involving three-carbon compounds [PATH:top00010]
top_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:top00010]
Other DBs
GO: 0006096 0006094
Organism
Thermodesulfobacterium geofontis [GN:top]
Gene
TOPB45_0411  Glucokinase [KO:K00845] [EC:2.7.1.2]
TOPB45_0294  phosphoglucose isomerase (PGI) [KO:K01810] [EC:5.3.1.9]
TOPB45_1305  6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
TOPB45_1302  hypothetical protein [KO:K01624] [EC:4.1.2.13]
TOPB45_0677  protein of unknown function DUF100 [KO:K01622] [EC:4.1.2.13 3.1.3.11]
TOPB45_0104  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
TOPB45_1384  Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) [KO:K00134] [EC:1.2.1.12]
TOPB45_1386  Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) [KO:K00134] [EC:1.2.1.12]
TOPB45_0105  Phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
TOPB45_0850  phosphonopyruvate decarboxylase-related protein [KO:K15635] [EC:5.4.2.12]
TOPB45_1613  proposed homoserine kinase [KO:K15635] [EC:5.4.2.12]
TOPB45_0128  Enolase [KO:K01689] [EC:4.2.1.11]
TOPB45_1042  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
TOPB45_1385  Pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
TOPB45_0109  phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
TOPB45_1600  Pyruvate synthase [KO:K00169] [EC:1.2.7.1]
TOPB45_1601  Pyruvate synthase [KO:K00170] [EC:1.2.7.1]
TOPB45_1598  pyruvate/ketoisovalerate oxidoreductase, gamma subunit [KO:K00172] [EC:1.2.7.1]
TOPB45_1599  pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit [KO:K00171] [EC:1.2.7.1]
TOPB45_0672  3-methyl-2-oxobutanoate dehydrogenase (ferredoxin) [KO:K00174] [EC:1.2.7.3 1.2.7.11]
TOPB45_0671  2-oxoglutarate synthase [KO:K00175] [EC:1.2.7.3 1.2.7.11]
TOPB45_0244  Alcohol dehydrogenase (NADP(+)) [KO:K13953] [EC:1.1.1.1]
TOPB45_0636  Acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
TOPB45_0633  acetyl coenzyme A synthetase (ADP forming), alpha domain protein [KO:K24012] [EC:6.2.1.13]
TOPB45_0214  phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III [KO:K15778] [EC:5.4.2.8 5.4.2.2]
TOPB45_0887  Aldehyde ferredoxin oxidoreductase [KO:K11389] [EC:1.2.7.6]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
top00020  Citrate cycle (TCA cycle)
top00030  Pentose phosphate pathway
top00500  Starch and sucrose metabolism
top00620  Pyruvate metabolism
top00640  Propanoate metabolism
top00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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