KEGG   PATHWAY: trb00630
Entry
trb00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Tardiphaga robiniae
Class
Metabolism; Carbohydrate metabolism
Pathway map
trb00630  Glyoxylate and dicarboxylate metabolism
trb00630

Module
trb_M00012  Glyoxylate cycle [PATH:trb00630]
trb_M00621  Glycine cleavage system [PATH:trb00630]
trb_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:trb00630]
Other DBs
GO: 0046487 0043648
Organism
Tardiphaga robiniae [GN:trb]
Gene
HB776_16345  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
HB776_06075  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
HB776_23830  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
HB776_29020  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
HB776_31340  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
HB776_15860  malate synthase G [KO:K01638] [EC:2.3.3.9]
HB776_23585  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
HB776_06605  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
HB776_23535  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
HB776_10765  bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
HB776_05350  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
HB776_05730  thiolase domain-containing protein [KO:K00626] [EC:2.3.1.9]
HB776_06040  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
HB776_09600  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
HB776_26500  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
HB776_26780  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
HB776_16170  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
HB776_27745  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
HB776_27910  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
HB776_28710  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
HB776_30710  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
HB776_27750  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
HB776_19865  MaoC family dehydratase [KO:K17865] [EC:4.2.1.55]
HB776_06495  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
HB776_05440  acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha [KO:K01965] [EC:6.4.1.3]
HB776_11655  acyl-CoA carboxylase subunit beta [KO:K01966] [EC:6.4.1.3 2.1.3.15]
HB776_04180  scpA; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
HB776_04195  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
HB776_29545  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
HB776_29550  FAD-binding protein [KO:K11472] [EC:1.1.99.14]
HB776_29555  glcF; glycolate oxidase subunit GlcF [KO:K11473] [EC:1.1.99.14]
HB776_00670  catalase [KO:K03781] [EC:1.11.1.6]
HB776_23455  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
HB776_00790  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
HB776_13465  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
HB776_12260  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
HB776_28945  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
HB776_04965  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
HB776_07085  HAD-IA family hydrolase [KO:K01091] [EC:3.1.3.18]
HB776_28755  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
HB776_18600  form I ribulose bisphosphate carboxylase large subunit [KO:K01601] [EC:4.1.1.39]
HB776_18595  ribulose bisphosphate carboxylase small subunit [KO:K01602] [EC:4.1.1.39]
HB776_02990  aminotransferase class V-fold PLP-dependent enzyme [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
HB776_25990  aminotransferase class V-fold PLP-dependent enzyme [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
HB776_08665  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
HB776_06300  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
HB776_15455  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
HB776_20420  glnT; type III glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
HB776_25475  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
HB776_10910  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
HB776_13705  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
HB776_13695  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
HB776_06875  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HB776_23635  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HB776_13700  gcvH; glycine cleavage system protein GcvH [KO:K02437]
HB776_15990  glycerate kinase [KO:K11529] [EC:2.7.1.165]
HB776_28615  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
HB776_29635  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
HB776_05345  eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
HB776_30430  cupin domain-containing protein [KO:K01569] [EC:4.1.1.2]
HB776_21740  formate dehydrogenase subunit delta [KO:K00126] [EC:1.17.1.9]
HB776_21750  fdhF; formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
HB776_21755  NADH-quinone oxidoreductase subunit NuoF [KO:K00124]
HB776_21760  formate dehydrogenase subunit gamma [KO:K00127]
HB776_01705  alpha/beta hydrolase [KO:K01432] [EC:3.5.1.9]
HB776_28320  alpha/beta hydrolase [KO:K01432] [EC:3.5.1.9]
HB776_03295  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
HB776_18125  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
HB776_25480  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
HB776_14695  acetamidase/formamidase family protein [KO:K01455] [EC:3.5.1.49]
HB776_04780  oxc; oxalyl-CoA decarboxylase [KO:K01577] [EC:4.1.1.8]
HB776_04775  frc; formyl-CoA transferase [KO:K07749] [EC:2.8.3.16]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
trb00010  Glycolysis / Gluconeogenesis
trb00020  Citrate cycle (TCA cycle)
trb00030  Pentose phosphate pathway
trb00053  Ascorbate and aldarate metabolism
trb00071  Fatty acid degradation
trb00230  Purine metabolism
trb00250  Alanine, aspartate and glutamate metabolism
trb00260  Glycine, serine and threonine metabolism
trb00620  Pyruvate metabolism
trb00710  Carbon fixation by Calvin cycle
trb00750  Vitamin B6 metabolism
trb00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

DBGET integrated database retrieval system