KEGG   PATHWAY: tsn00630
Entry
tsn00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Candidatus Pseudothioglobus singularis
Class
Metabolism; Carbohydrate metabolism
Pathway map
tsn00630  Glyoxylate and dicarboxylate metabolism
tsn00630

Module
tsn_M00012  Glyoxylate cycle [PATH:tsn00630]
tsn_M00621  Glycine cleavage system [PATH:tsn00630]
Other DBs
GO: 0046487 0043648
Organism
Candidatus Pseudothioglobus singularis [GN:tsn]
Gene
W908_04120  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
W908_03010  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
W908_04105  malate synthase [KO:K01638] [EC:2.3.3.9]
W908_02200  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
W908_00175  citrate synthase [KO:K01647] [EC:2.3.3.1]
W908_07645  bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
W908_06420  succinyl-CoA synthetase subunit alpha [KO:K08692] [EC:6.2.1.9]
W908_06425  sucC; malate--CoA ligase subunit beta [KO:K14067] [EC:6.2.1.9]
W908_03165  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
W908_06430  Malyl-CoA lyase [KO:K08691] [EC:4.1.3.24 4.1.3.25]
W908_06510  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
W908_06505  dehydrogenase [KO:K11472] [EC:1.1.99.14]
W908_06500  glycolate oxidase iron-sulfur subunit GlcF [KO:K11473] [EC:1.1.99.14]
W908_00555  hydroxyacid dehydrogenase [KO:K12972] [EC:1.1.1.79 1.1.1.81]
W908_00810  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
W908_07020  haloacid dehalogenase [KO:K01091] [EC:3.1.3.18]
W908_06145  rbcL; ribulose bisophosphate carboxylase [KO:K01601] [EC:4.1.1.39]
W908_06140  ribulose bisphosphate carboxylase small chain [KO:K01602] [EC:4.1.1.39]
W908_06515  alanine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
W908_02485  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
W908_01930  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
W908_04005  glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
W908_05685  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
W908_01950  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
W908_04665  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
W908_00570  glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
W908_00560  gcvT; glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
W908_05660  aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
W908_07500  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
W908_00565  glycine cleavage system protein H [KO:K02437]
W908_01895  glycerate kinase [KO:K00865] [EC:2.7.1.165]
W908_08055  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
tsn00010  Glycolysis / Gluconeogenesis
tsn00020  Citrate cycle (TCA cycle)
tsn00030  Pentose phosphate pathway
tsn00053  Ascorbate and aldarate metabolism
tsn00071  Fatty acid degradation
tsn00230  Purine metabolism
tsn00250  Alanine, aspartate and glutamate metabolism
tsn00260  Glycine, serine and threonine metabolism
tsn00620  Pyruvate metabolism
tsn00710  Carbon fixation by Calvin cycle
tsn00750  Vitamin B6 metabolism
tsn00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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