KEGG   PATHWAY: vci00970
Entry
vci00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Vibrio cholerae O1 IEC224
Class
Genetic Information Processing; Translation
Pathway map
vci00970  Aminoacyl-tRNA biosynthesis
vci00970

Organism
Vibrio cholerae O1 IEC224 [GN:vci]
Gene
O3Y_t13277  tRNA-Ala [KO:K14218]
O3Y_t13299  tRNA-Ala [KO:K14218]
O3Y_t13451  tRNA-Ala [KO:K14218]
O3Y_t13443  tRNA-Ala [KO:K14218]
O3Y_t13329  tRNA-Ala [KO:K14218]
O3Y_t13401  tRNA-Arg [KO:K14219]
O3Y_t13287  tRNA-Arg [KO:K14219]
O3Y_t13359  tRNA-Arg [KO:K14219]
O3Y_t13363  tRNA-Arg [KO:K14219]
O3Y_t13367  tRNA-Arg [KO:K14219]
O3Y_t13361  tRNA-Arg [KO:K14219]
O3Y_t13355  tRNA-Arg [KO:K14219]
O3Y_t13365  tRNA-Arg [KO:K14219]
O3Y_t13333  tRNA-Asn [KO:K14220]
O3Y_t13337  tRNA-Asn [KO:K14220]
O3Y_t13343  tRNA-Asn [KO:K14220]
O3Y_t13385  tRNA-Asn [KO:K14220]
O3Y_t13279  tRNA-Asp [KO:K14221]
O3Y_t13449  tRNA-Asp [KO:K14221]
O3Y_t13331  tRNA-Asp [KO:K14221]
O3Y_t13301  tRNA-Asp [KO:K14221]
O3Y_t13375  tRNA-Asp [KO:K14221]
O3Y_t13387  tRNA-Cys [KO:K14222]
O3Y_t18706  tRNA-Cys [KO:K14222]
O3Y_t18702  tRNA-Cys [KO:K14222]
O3Y_t13413  tRNA-Gln [KO:K14223]
O3Y_t13435  tRNA-Gln [KO:K14223]
O3Y_t13419  tRNA-Gln [KO:K14223]
O3Y_t13431  tRNA-Gln [KO:K14223]
O3Y_t13423  tRNA-Gln [KO:K14223]
O3Y_t13283  tRNA-Glu [KO:K14224]
O3Y_t13373  tRNA-Glu [KO:K14224]
O3Y_t13457  tRNA-Glu [KO:K14224]
O3Y_t13463  tRNA-Glu [KO:K14224]
O3Y_t13307  tRNA-Gly [KO:K14225]
O3Y_t18700  tRNA-Gly [KO:K14225]
O3Y_t13311  tRNA-Gly [KO:K14225]
O3Y_t13393  tRNA-Gly [KO:K14225]
O3Y_t13313  tRNA-Gly [KO:K14225]
O3Y_t13389  tRNA-Gly [KO:K14225]
O3Y_t13315  tRNA-Gly [KO:K14225]
O3Y_t13319  tRNA-Gly [KO:K14225]
O3Y_t13289  tRNA-His [KO:K14226]
O3Y_t13293  tRNA-His [KO:K14226]
O3Y_t13297  tRNA-Ile [KO:K14227]
O3Y_t13445  tRNA-Ile [KO:K14227]
O3Y_t13327  tRNA-Ile [KO:K14227]
O3Y_t13369  tRNA-Leu [KO:K14228]
O3Y_t13391  tRNA-Leu [KO:K14228]
O3Y_t18704  tRNA-Leu [KO:K14228]
O3Y_t13409  tRNA-Leu [KO:K14228]
O3Y_t13417  tRNA-Leu [KO:K14228]
O3Y_t13429  tRNA-Leu [KO:K14228]
O3Y_t13411  tRNA-Leu [KO:K14228]
O3Y_t13425  tRNA-Leu [KO:K14228]
O3Y_t13433  tRNA-Leu [KO:K14228]
O3Y_t13421  tRNA-Leu [KO:K14228]
O3Y_t13437  tRNA-Leu [KO:K14228]
O3Y_t13447  tRNA-Leu [KO:K14228]
O3Y_t13455  tRNA-Lys [KO:K14229]
O3Y_t13461  tRNA-Lys [KO:K14229]
O3Y_t13407  tRNA-Met [KO:K14230]
O3Y_t13427  tRNA-Met [KO:K14230]
O3Y_t13415  tRNA-Met [KO:K14230]
O3Y_t13325  tRNA-Met [KO:K14230]
O3Y_t13351  tRNA-Met [KO:K14230]
O3Y_t13317  tRNA-Met [KO:K14230]
O3Y_t13323  tRNA-Met [KO:K14230]
O3Y_t13371  tRNA-Met [KO:K14230]
O3Y_t13321  tRNA-Met [KO:K14230]
O3Y_t13341  tRNA-Phe [KO:K14231]
O3Y_t13349  tRNA-Phe [KO:K14231]
O3Y_t13345  tRNA-Phe [KO:K14231]
O3Y_t13291  tRNA-Pro [KO:K14232]
O3Y_t13295  tRNA-Pro [KO:K14232]
O3Y_t13439  tRNA-Pro [KO:K14232]
O3Y_t13403  tRNA-Pro [KO:K14232]
O3Y_t13285  tRNA-Ser [KO:K14233]
O3Y_t13405  tRNA-Ser [KO:K14233]
O3Y_t13353  tRNA-Ser [KO:K14233]
O3Y_t13357  tRNA-Ser [KO:K14233]
O3Y_t13399  tRNA-Ser [KO:K14233]
O3Y_t13309  tRNA-Thr [KO:K14234]
O3Y_t13303  tRNA-Thr [KO:K14234]
O3Y_t13339  tRNA-Thr [KO:K14234]
O3Y_t13335  tRNA-Thr [KO:K14234]
O3Y_t13347  tRNA-Thr [KO:K14234]
O3Y_t13441  tRNA-Thr [KO:K14234]
O3Y_t13281  tRNA-Trp [KO:K14235]
O3Y_t13305  tRNA-Tyr [KO:K14236]
O3Y_t13381  tRNA-Tyr [KO:K14236]
O3Y_t13379  tRNA-Tyr [KO:K14236]
O3Y_t13377  tRNA-Tyr [KO:K14236]
O3Y_t13383  tRNA-Tyr [KO:K14236]
O3Y_t13397  tRNA-Val [KO:K14237]
O3Y_t13395  tRNA-Val [KO:K14237]
O3Y_t13453  tRNA-Val [KO:K14237]
O3Y_t13459  tRNA-Val [KO:K14237]
O3Y_10660  gltX; glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
O3Y_04625  glutaminyl-tRNA synthetase [KO:K01886] [EC:6.1.1.18]
O3Y_02575  alaS; alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
O3Y_03555  hypothetical protein [KO:K01872] [EC:6.1.1.7]
O3Y_05440  aspS; aspartyl-tRNA synthetase [KO:K01876] [EC:6.1.1.12]
O3Y_06035  asnC; asparaginyl-tRNA synthetase [KO:K01893] [EC:6.1.1.22]
O3Y_00095  glyQ; glycyl-tRNA synthetase subunit alpha [KO:K01878] [EC:6.1.1.14]
O3Y_00090  glyS; glycyl-tRNA synthetase subunit beta [KO:K01879] [EC:6.1.1.14]
O3Y_14803  thrS; threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
O3Y_05165  seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
O3Y_08955  cysS; cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
O3Y_04800  metG; methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
O3Y_00210  fmt; methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
O3Y_11985  valS; valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
O3Y_04440  leuS; leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
O3Y_03190  ileS; isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
O3Y_03105  lysS; lysyl-tRNA synthetase [KO:K04567] [EC:6.1.1.6]
O3Y_10020  argS; arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
O3Y_04070  prolyl-tRNA synthetase [KO:K01881] [EC:6.1.1.15]
O3Y_03535  hisS; histidyl-tRNA synthetase [KO:K01892] [EC:6.1.1.21]
O3Y_05690  pheS; phenylalanyl-tRNA synthetase subunit alpha [KO:K01889] [EC:6.1.1.20]
O3Y_05695  pheT; phenylalanyl-tRNA synthetase subunit beta [KO:K01890] [EC:6.1.1.20]
O3Y_02160  tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
O3Y_02940  tyrosyl-tRNA synthetase [KO:K01866] [EC:6.1.1.1]
O3Y_12560  tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
vci00250  Alanine, aspartate and glutamate metabolism
vci00260  Glycine, serine and threonine metabolism
vci00270  Cysteine and methionine metabolism
vci00290  Valine, leucine and isoleucine biosynthesis
vci00300  Lysine biosynthesis
vci00330  Arginine and proline metabolism
vci00340  Histidine metabolism
vci00380  Tryptophan metabolism
vci00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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