KEGG   PATHWAY: vcl00970
Entry
vcl00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Vibrio cholerae O1 LMA3984-4
Class
Genetic Information Processing; Translation
Pathway map
vcl00970  Aminoacyl-tRNA biosynthesis
vcl00970

Organism
Vibrio cholerae O1 LMA3984-4 [GN:vcl]
Gene
VCLMA_At001  tRNA-Ala [KO:K14218]
VCLMA_At012  tRNA-Ala [KO:K14218]
VCLMA_At077  tRNA-Ala [KO:K14218]
VCLMA_At083  tRNA-Ala [KO:K14218]
VCLMA_At006  tRNA-Arg [KO:K14219]
VCLMA_At056  tRNA-Arg [KO:K14219]
VCLMA_At033  tRNA-Arg [KO:K14219]
VCLMA_At038  tRNA-Arg [KO:K14219]
VCLMA_At036  tRNA-Arg [KO:K14219]
VCLMA_At037  tRNA-Arg [KO:K14219]
VCLMA_At039  tRNA-Arg [KO:K14219]
VCLMA_At035  tRNA-Arg [KO:K14219]
VCLMA_At048  tRNA-Asn [KO:K14220]
VCLMA_At027  pseudogene [KO:K14220]
VCLMA_At028  tRNA-Asn [KO:K14220]
VCLMA_At002  tRNA-Asp [KO:K14221]
VCLMA_At082  tRNA-Asp [KO:K14221]
VCLMA_At013  tRNA-Asp [KO:K14221]
VCLMA_At026  tRNA-Asp [KO:K14221]
VCLMA_At043  tRNA-Asp [KO:K14221]
VCLMA_At049  tRNA-Cys [KO:K14222]
VCLMA_Bt03  tRNA-Cys [KO:K14222]
VCLMA_Bt02  tRNA-Cys [KO:K14222]
VCLMA_At062  tRNA-Gln [KO:K14223]
VCLMA_At071  tRNA-Gln [KO:K14223]
VCLMA_At065  tRNA-Gln [KO:K14223]
VCLMA_At067  tRNA-Gln [KO:K14223]
VCLMA_At073  tRNA-Gln [KO:K14223]
VCLMA_At004  tRNA-Glu [KO:K14224]
VCLMA_At086  tRNA-Glu [KO:K14224]
VCLMA_At080  tRNA-Glu [KO:K14224]
VCLMA_At042  tRNA-Glu [KO:K14224]
VCLMA_At089  tRNA-Glu [KO:K14224]
VCLMA_At016  tRNA-Gly [KO:K14225]
VCLMA_Bt01  tRNA-Gly [KO:K14225]
VCLMA_At018  tRNA-Gly [KO:K14225]
VCLMA_At020  tRNA-Gly [KO:K14225]
VCLMA_At019  tRNA-Gly [KO:K14225]
VCLMA_At050  tRNA-Gly [KO:K14225]
VCLMA_At022  tRNA-Gly [KO:K14225]
VCLMA_At052  tRNA-Gly [KO:K14225]
VCLMA_At007  tRNA-His [KO:K14226]
VCLMA_At009  tRNA-His [KO:K14226]
VCLMA_At011  tRNA-Ile [KO:K14227]
VCLMA_At025  tRNA-Ile [KO:K14227]
VCLMA_At060  tRNA-Leu [KO:K14228]
VCLMA_At070  tRNA-Leu [KO:K14228]
VCLMA_At064  tRNA-Leu [KO:K14228]
VCLMA_At040  tRNA-Leu [KO:K14228]
VCLMA_At051  tRNA-Leu [KO:K14228]
VCLMA_At061  pseudogene [KO:K14228]
VCLMA_At068  tRNA-Leu [KO:K14228]
VCLMA_At072  tRNA-Leu [KO:K14228]
VCLMA_At066  tRNA-Leu [KO:K14228]
VCLMA_At074  tRNA-Leu [KO:K14228]
VCLMA_At081  tRNA-Leu [KO:K14228]
VCLMA_At079  tRNA-Lys [KO:K14229]
VCLMA_At088  tRNA-Lys [KO:K14229]
VCLMA_At085  tRNA-Lys [KO:K14229]
VCLMA_At059  tRNA-Met [KO:K14230]
VCLMA_At069  tRNA-Met [KO:K14230]
VCLMA_At063  tRNA-Met [KO:K14230]
VCLMA_At041  tRNA-Met [KO:K14230]
VCLMA_At021  tRNA-Met [KO:K14230]
VCLMA_At024  tRNA-Met [KO:K14230]
VCLMA_At023  tRNA-Met [KO:K14230]
VCLMA_At031  tRNA-Met [KO:K14230]
VCLMA_At029  tRNA-Phe [KO:K14231]
VCLMA_At010  tRNA-Pro [KO:K14232]
VCLMA_At075  tRNA-Pro [KO:K14232]
VCLMA_At008  tRNA-Pro [KO:K14232]
VCLMA_At057  tRNA-Pro [KO:K14232]
VCLMA_At005  tRNA-Ser [KO:K14233]
VCLMA_At058  tRNA-Ser [KO:K14233]
VCLMA_At032  tRNA-Ser [KO:K14233]
VCLMA_At034  tRNA-Ser [KO:K14233]
VCLMA_At055  tRNA-Ser [KO:K14233]
VCLMA_At014  tRNA-Thr [KO:K14234]
VCLMA_At030  tRNA-Thr [KO:K14234]
VCLMA_At017  tRNA-Thr [KO:K14234]
VCLMA_At076  tRNA-Thr [KO:K14234]
VCLMA_At003  tRNA-Trp [KO:K14235]
VCLMA_At015  tRNA-Tyr [KO:K14236]
VCLMA_At044  tRNA-Tyr [KO:K14236]
VCLMA_At045  tRNA-Tyr [KO:K14236]
VCLMA_At047  tRNA-Tyr [KO:K14236]
VCLMA_At046  tRNA-Tyr [KO:K14236]
VCLMA_At053  tRNA-Val [KO:K14237]
VCLMA_At054  tRNA-Val [KO:K14237]
VCLMA_At078  tRNA-Val [KO:K14237]
VCLMA_At087  tRNA-Val [KO:K14237]
VCLMA_At084  tRNA-Val [KO:K14237]
VCLMA_A1939  Glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
VCLMA_A0854  Glutaminyl-tRNA synthetase [KO:K01886] [EC:6.1.1.18]
VCLMA_A0475  Alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
VCLMA_A1019  Aspartyl-tRNA synthetase [KO:K01876] [EC:6.1.1.12]
VCLMA_A1139  Asparaginyl-tRNA synthetase [KO:K01893] [EC:6.1.1.22]
VCLMA_A0019  glyQ; Glycyl-tRNA synthetase alpha chain [KO:K01878] [EC:6.1.1.14]
VCLMA_A0018  glyS; Glycyl-tRNA synthetase beta chain [KO:K01879] [EC:6.1.1.14]
VCLMA_B0250  Threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
VCLMA_B0255  Threonyl-tRNA synthetase [KO:K01868] [EC:6.1.1.3]
VCLMA_A0963  Seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
VCLMA_A1597  Cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
VCLMA_A0891  Methionyl-tRNA synthetase [KO:K01874] [EC:6.1.1.10]
VCLMA_A0043  fmt; Methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
VCLMA_A2203  Valyl-tRNA synthetase [KO:K01873] [EC:6.1.1.9]
VCLMA_A0816  Leucyl-tRNA synthetase [KO:K01869] [EC:6.1.1.4]
VCLMA_A0604  Isoleucyl-tRNA synthetase [KO:K01870] [EC:6.1.1.5]
VCLMA_A0585  Lysyl-tRNA synthetase (class II) [KO:K04567] [EC:6.1.1.6]
VCLMA_A1811  Arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
VCLMA_A0749  Prolyl-tRNA synthetase Bacterial type [KO:K01881] [EC:6.1.1.15]
VCLMA_A1070  Phenylalanyl-tRNA synthetase alpha chain [KO:K01889] [EC:6.1.1.20]
VCLMA_A1071  Phenylalanyl-tRNA synthetase beta chain [KO:K01890] [EC:6.1.1.20]
VCLMA_A0423  Tyrosyl-tRNA synthetase cluster 1 [KO:K01866] [EC:6.1.1.1]
VCLMA_A0552  Tyrosyl-tRNA synthetase cluster 1 [KO:K01866] [EC:6.1.1.1]
VCLMA_A2318  Tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
vcl00250  Alanine, aspartate and glutamate metabolism
vcl00260  Glycine, serine and threonine metabolism
vcl00270  Cysteine and methionine metabolism
vcl00290  Valine, leucine and isoleucine biosynthesis
vcl00300  Lysine biosynthesis
vcl00330  Arginine and proline metabolism
vcl00340  Histidine metabolism
vcl00380  Tryptophan metabolism
vcl00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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