KEGG   PATHWAY: vcy00970
Entry
vcy00970                    Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Vibrio coralliilyticus RE98
Class
Genetic Information Processing; Translation
Pathway map
vcy00970  Aminoacyl-tRNA biosynthesis
vcy00970

Organism
Vibrio coralliilyticus RE98 [GN:vcy]
Gene
IX92_00140  tRNA-Ala [KO:K14218]
IX92_01575  tRNA-Ala [KO:K14218]
IX92_00670  tRNA-Ala [KO:K14218]
IX92_14275  tRNA-Ala [KO:K14218]
IX92_00995  tRNA-Ala [KO:K14218]
IX92_02215  tRNA-Ala [KO:K14218]
IX92_03925  tRNA-Arg [KO:K14219]
IX92_01300  tRNA-Arg [KO:K14219]
IX92_01330  tRNA-Arg [KO:K14219]
IX92_01320  tRNA-Arg [KO:K14219]
IX92_01310  tRNA-Arg [KO:K14219]
IX92_00435  tRNA-Arg [KO:K14219]
IX92_11330  tRNA-Arg [KO:K14219]
IX92_01315  tRNA-Arg [KO:K14219]
IX92_01325  tRNA-Arg [KO:K14219]
IX92_10605  tRNA-Asn [KO:K14220]
IX92_13400  tRNA-Asn [KO:K14220]
IX92_13410  tRNA-Asn [KO:K14220]
IX92_13385  tRNA-Asn [KO:K14220]
IX92_00160  tRNA-Asp [KO:K14221]
IX92_00685  tRNA-Asp [KO:K14221]
IX92_14230  tRNA-Asp [KO:K14221]
IX92_01010  tRNA-Asp [KO:K14221]
IX92_02235  tRNA-Asp [KO:K14221]
IX92_01600  tRNA-Asp [KO:K14221]
IX92_09240  tRNA-Cys [KO:K14222]
IX92_21125  tRNA-Cys [KO:K14222]
IX92_21105  tRNA-Cys [KO:K14222]
IX92_11130  tRNA-Gln [KO:K14223]
IX92_11195  tRNA-Gln [KO:K14223]
IX92_11205  tRNA-Gln [KO:K14223]
IX92_11150  tRNA-Gln [KO:K14223]
IX92_11170  tRNA-Gln [KO:K14223]
IX92_11160  tRNA-Gln [KO:K14223]
IX92_00130  tRNA-Glu [KO:K14224]
IX92_02220  tRNA-Glu [KO:K14224]
IX92_00970  tRNA-Glu [KO:K14224]
IX92_15725  tRNA-Glu [KO:K14224]
IX92_14255  tRNA-Glu [KO:K14224]
IX92_09225  tRNA-Gly [KO:K14225]
IX92_13840  tRNA-Gly [KO:K14225]
IX92_13860  tRNA-Gly [KO:K14225]
IX92_13850  tRNA-Gly [KO:K14225]
IX92_09235  tRNA-Gly [KO:K14225]
IX92_13880  tRNA-Gly [KO:K14225]
IX92_13835  tRNA-Gly [KO:K14225]
IX92_13870  tRNA-Gly [KO:K14225]
IX92_14015  tRNA-Gly [KO:K14225]
IX92_19515  tRNA-Gly [KO:K14225]
IX92_00440  tRNA-His [KO:K14226]
IX92_00450  tRNA-His [KO:K14226]
IX92_00665  tRNA-Ile [KO:K14227]
IX92_01570  tRNA-Ile [KO:K14227]
IX92_14280  tRNA-Ile [KO:K14227]
IX92_00990  tRNA-Ile [KO:K14227]
IX92_01385  tRNA-Leu [KO:K14228]
IX92_09230  tRNA-Leu [KO:K14228]
IX92_21110  tRNA-Leu [KO:K14228]
IX92_11125  tRNA-Leu [KO:K14228]
IX92_11220  tRNA-Leu [KO:K14228]
IX92_11140  tRNA-Leu [KO:K14228]
IX92_11210  tRNA-Leu [KO:K14228]
IX92_11190  tRNA-Leu [KO:K14228]
IX92_11145  tRNA-Leu [KO:K14228]
IX92_11185  tRNA-Leu [KO:K14228]
IX92_11200  tRNA-Leu [KO:K14228]
IX92_11155  tRNA-Leu [KO:K14228]
IX92_11175  tRNA-Leu [KO:K14228]
IX92_11165  tRNA-Leu [KO:K14228]
IX92_12535  tRNA-Leu [KO:K14228]
IX92_00135  tRNA-Lys [KO:K14229]
IX92_15720  tRNA-Lys [KO:K14229]
IX92_14250  tRNA-Lys [KO:K14229]
IX92_13085  tRNA-Met [KO:K14230]
IX92_12530  tRNA-Met [KO:K14230]
IX92_13875  tRNA-Met [KO:K14230]
IX92_13865  tRNA-Met [KO:K14230]
IX92_13845  tRNA-Met [KO:K14230]
IX92_13855  tRNA-Met [KO:K14230]
IX92_11120  tRNA-Met [KO:K14230]
IX92_11215  tRNA-Met [KO:K14230]
IX92_11135  tRNA-Met [KO:K14230]
IX92_11180  tRNA-Met [KO:K14230]
IX92_13370  tRNA-Phe [KO:K14231]
IX92_13390  tRNA-Phe [KO:K14231]
IX92_13380  tRNA-Phe [KO:K14231]
IX92_10350  tRNA-Pro [KO:K14232]
IX92_00445  tRNA-Pro [KO:K14232]
IX92_00455  tRNA-Pro [KO:K14232]
IX92_03100  tRNA-Pro [KO:K14232]
IX92_09780  tRNA-Ser [KO:K14233]
IX92_10400  tRNA-Ser [KO:K14233]
IX92_22245  tRNA-Ser [KO:K14233]
IX92_15700  tRNA-Ser [KO:K14233]
IX92_01295  tRNA-Ser [KO:K14233]
IX92_01305  tRNA-Ser [KO:K14233]
IX92_14010  tRNA-Thr [KO:K14234]
IX92_01590  tRNA-Thr [KO:K14234]
IX92_13375  tRNA-Thr [KO:K14234]
IX92_13405  tRNA-Thr [KO:K14234]
IX92_14025  tRNA-Thr [KO:K14234]
IX92_13395  tRNA-Thr [KO:K14234]
IX92_00165  tRNA-Trp [KO:K14235]
IX92_02240  tRNA-Trp [KO:K14235]
IX92_11670  tRNA-Tyr [KO:K14236]
IX92_11675  tRNA-Tyr [KO:K14236]
IX92_11680  tRNA-Tyr [KO:K14236]
IX92_14020  tRNA-Tyr [KO:K14236]
IX92_11685  tRNA-Tyr [KO:K14236]
IX92_00145  tRNA-Val [KO:K14237]
IX92_14245  tRNA-Val [KO:K14237]
IX92_15715  tRNA-Val [KO:K14237]
IX92_07875  tRNA-Val [KO:K14237]
IX92_07880  tRNA-Val [KO:K14237]
IX92_11380  glutamyl-tRNA synthetase [KO:K01885] [EC:6.1.1.17]
IX92_03145  glutamate--tRNA ligase [KO:K01886] [EC:6.1.1.18]
IX92_01280  alanyl-tRNA synthetase [KO:K01872] [EC:6.1.1.7]
IX92_02775  metal-dependent hydrolase [KO:K01872] [EC:6.1.1.7]
IX92_09995  aspartyl-tRNA synthetase [KO:K01876] [EC:6.1.1.12]
IX92_05485  asparaginyl-tRNA synthetase [KO:K01893] [EC:6.1.1.22]
IX92_15920  glycyl-tRNA synthetase [KO:K01878] [EC:6.1.1.14]
IX92_15925  glycine-tRNA synthetase subunit beta [KO:K01879] [EC:6.1.1.14]
IX92_18705  thrS; threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
IX92_04135  seryl-tRNA synthetase [KO:K01875] [EC:6.1.1.11]
IX92_10155  cysteinyl-tRNA synthetase [KO:K01883] [EC:6.1.1.16]
IX92_10505  metG; methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
IX92_15205  hypothetical protein [KO:K00604] [EC:2.1.2.9]
IX92_15790  fmt; methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
IX92_01235  valyl-tRNA synthase [KO:K01873] [EC:6.1.1.9]
IX92_11580  leuS; leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
IX92_02055  ileS; isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
IX92_12570  lysS; lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
IX92_03715  arginyl-tRNA synthetase [KO:K01887] [EC:6.1.1.19]
IX92_11750  proline--tRNA ligase [KO:K01881] [EC:6.1.1.15]
IX92_02755  histidinol dehydrogenase [KO:K01892] [EC:6.1.1.21]
IX92_09180  phenylalanine--tRNA ligase alpha subunit [KO:K01889] [EC:6.1.1.20]
IX92_09175  pheT; phenylalanine--tRNA ligase [KO:K01890] [EC:6.1.1.20]
IX92_12660  tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
IX92_14120  tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
IX92_21375  tryptophanyl-tRNA synthetase [KO:K01867] [EC:6.1.1.2]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
vcy00250  Alanine, aspartate and glutamate metabolism
vcy00260  Glycine, serine and threonine metabolism
vcy00270  Cysteine and methionine metabolism
vcy00290  Valine, leucine and isoleucine biosynthesis
vcy00300  Lysine biosynthesis
vcy00330  Arginine and proline metabolism
vcy00340  Histidine metabolism
vcy00380  Tryptophan metabolism
vcy00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   
LinkDB

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