KEGG   PATHWAY: vir00010
Entry
vir00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Virgibacillus sp. SK37
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
vir00010  Glycolysis / Gluconeogenesis
vir00010

Module
vir_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:vir00010]
vir_M00002  Glycolysis, core module involving three-carbon compounds [PATH:vir00010]
vir_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:vir00010]
vir_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:vir00010]
Other DBs
GO: 0006096 0006094
Organism
Virgibacillus sp. SK37 [GN:vir]
Gene
X953_15090  6-phosphate glucose kinase [KO:K25026] [EC:2.7.1.2]
X953_16725  transcriptional regulator [KO:K25026] [EC:2.7.1.2]
X953_09880  glucokinase [KO:K25026] [EC:2.7.1.2]
X953_13340  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
X953_08705  6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
X953_17405  glpX; fructose 1,6-bisphosphatase [KO:K02446] [EC:3.1.3.11]
X953_04220  fructose-1,6-bisphosphatase [KO:K04041] [EC:3.1.3.11]
X953_07480  fructose-bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
X953_17420  fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
X953_13800  tpiA; triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
X953_13810  gapA; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
X953_08770  gapA; glyceraldehyde-3-phosphate dehydrogenase [KO:K00150] [EC:1.2.1.59]
X953_13805  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
X953_18650  phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
X953_07425  phosphoglycerate kinase [KO:K15634] [EC:5.4.2.11]
X953_13795  phosphoglyceromutase [KO:K15633] [EC:5.4.2.12]
X953_13790  eno; enolase [KO:K01689] [EC:4.2.1.11]
X953_08710  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
X953_12670  pyruvate dehydrogenase E1 subunit alpha [KO:K00161] [EC:1.2.4.1]
X953_12665  2-oxoisovalerate dehydrogenase subunit beta [KO:K00162] [EC:1.2.4.1]
X953_12660  branched-chain alpha-keto acid dehydrogenase subunit E2 [KO:K00627] [EC:2.3.1.12]
X953_12655  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
X953_10430  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
X953_02260  alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
X953_15930  betaine-aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
X953_10490  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
X953_07260  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
X953_07575  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
X953_14250  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
X953_03935  acyl--CoA ligase [KO:K01895] [EC:6.2.1.1]
X953_00150  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
X953_16820  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
X953_17650  phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
X953_13220  phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
X953_19405  diacetylchitobiose-6-phosphate hydrolase [KO:K01222] [EC:3.2.1.86]
X953_18350  PTS glucose transporter subunit IIA [KO:K02777] [EC:2.7.1.-]
X953_18490  PTS glucose transporter subunit IIABC [KO:K20118] [EC:2.7.1.199]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
vir00020  Citrate cycle (TCA cycle)
vir00030  Pentose phosphate pathway
vir00500  Starch and sucrose metabolism
vir00620  Pyruvate metabolism
vir00640  Propanoate metabolism
vir00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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