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Entry
Name
ABC transporters - Vibrio nigripulchritudo
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Vibrio nigripulchritudo [GN:
vni ]
Gene
VIBNI_A1674 putative ABC-type tungstate transport system, permease protein [KO:K05773 ]
VIBNI_B0166 putative ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component [KO:K15576 ]
VIBNI_A1378 putative Hydroxymethylpyrimidine ABC transporter, periplasmic component [KO:K15598 ]
VIBNI_A1379 putative Hydroxymethylpyrimidine ABC transporter, permease component [KO:K15599 ]
VIBNI_B1724 putative ABC-type Fe3+ transport system, periplasmic component [KO:K02012 ]
VIBNI_A3284 putative ABC-type Fe3+ transport system, periplasmic component [KO:K02012 ]
VIBNI_A3285 putative ABC-type phosphate transport system, permease component [KO:K02011 ]
VIBNI_A1728 potC; Spermidine/putrescine transport system permease protein potC [KO:K11070 ]
VIBNI_A1729 potB; Spermidine/putrescine transport system permease protein potB [KO:K11071 ]
VIBNI_B0638 putative ABC-type proline/glycine betaine transport systems, periplasmic component [KO:K02002 ]
VIBNI_A0306 lacK; Lactose transport ATP-binding protein lacK [KO:K10111 ] [EC:7.5.2.-]
VIBNI_A0795 ugpC; sn-glycerol-3-phosphate import ATP-binding protein ugpC [KO:K10111 ] [EC:7.5.2.-]
VIBNI_A1684 malK; Maltose/maltodextrin import ATP-binding protein MalK [KO:K10111 ] [EC:7.5.2.-]
VIBNI_B0084 lacK; Lactose transport ATP-binding protein lacK [KO:K10111 ] [EC:7.5.2.-]
VIBNI_B1532 malK; Maltose/maltodextrin import ATP-binding protein malK [KO:K10111 ] [EC:7.5.2.-]
VIBNI_B1631 malK; Maltose/maltodextrin import ATP-binding protein malK [KO:K10111 ] [EC:7.5.2.-]
VIBNI_B1384 lacK; Lactose transport ATP-binding protein lacK [KO:K10111 ] [EC:7.5.2.-]
VIBNI_B1737 msmX; Maltodextrin import ATP-binding protein msmX [KO:K10112 ] [EC:7.5.2.-]
VIBNI_B0228 msmK; Multiple sugar-binding transport ATP-binding protein msmK [KO:K10112 ] [EC:7.5.2.-]
VIBNI_B0413 ugpC; sn-glycerol-3-phosphate import ATP-binding protein ugpC [KO:K10112 ] [EC:7.5.2.-]
VIBNI_B1398 msmX; Maltodextrin import ATP-binding protein msmX [KO:K10112 ] [EC:7.5.2.-]
VIBNI_B1070 ugpC; sn-glycerol-3-phosphate import ATP-binding protein ugpC [KO:K10112 ] [EC:7.5.2.-]
VIBNI_A1246 lacK; Lactose transport ATP-binding protein lacK [KO:K10112 ] [EC:7.5.2.-]
VIBNI_A2444 msmX; Maltodextrin import ATP-binding protein msmX [KO:K10112 ] [EC:7.5.2.-]
VIBNI_A2699 msmX; Maltodextrin import ATP-binding protein msmX [KO:K10112 ] [EC:7.5.2.-]
VIBNI_A1289 ugpC; sn-glycerol-3-phosphate import ATP-binding protein ugpC [KO:K10112 ] [EC:7.5.2.-]
VIBNI_A1185 msmX; Maltodextrin import ATP-binding protein msmX [KO:K10112 ] [EC:7.5.2.-]
VIBNI_A1909 msmX; Maltodextrin import ATP-binding protein msmX [KO:K10112 ] [EC:7.5.2.-]
VIBNI_B1792 ugpC; sn-glycerol-3-phosphate import ATP-binding protein ugpC [KO:K10112 ] [EC:7.5.2.-]
VIBNI_A0303 putative ABC-type sugar transport system, periplasmic component [KO:K10117 ]
VIBNI_A0799 putative ABC-type sugar transport system, periplasmic component [KO:K10117 ]
VIBNI_B0085 putative ABC-type sugar transport system, periplasmic component [KO:K10117 ]
VIBNI_B1536 putative ABC-type sugar transport system, periplasmic component [KO:K10117 ]
VIBNI_A0798 putative ABC-type sugar transport systems, permease component [KO:K10118 ]
VIBNI_B0083 putative ABC-type sugar transport systems, permease component [KO:K10118 ]
VIBNI_B1535 putative ABC-type sugar transport systems, permease component [KO:K10118 ]
VIBNI_B1534 putative ABC-type sugar transport systems, permease component [KO:K10119 ]
VIBNI_A1680 putative polyols ABC transporter, periplasmic substrate-binding protein [KO:K10227 ]
VIBNI_B0530 putative ABC-type sugar transport system, periplasmic component [KO:K10236 ]
VIBNI_B1733 putative ABC-type sugar transport system, periplasmic component [KO:K10240 ]
VIBNI_A2961 putative ABC-type transport system involved in resistance to organic solvents, auxiliary component [KO:K07323 ]
VIBNI_A2962 putative Sulphate transporter/antisigma-factor antagonist STAS [KO:K07122 ]
VIBNI_A1038 putative nucleoside ABC transporter, substrate-binding component [KO:K07335 ]
VIBNI_A0271 putative ABC-type sugar transport system, periplasmic component [KO:K17315 ]
VIBNI_A0254 putative ABC-type sugar transport system, periplasmic component [KO:K10439 ]
VIBNI_B0302 putative ABC-type sugar transport system, periplasmic component [KO:K10439 ]
VIBNI_B0320 putative ABC-type sugar transport system, periplasmic component [KO:K10439 ]
VIBNI_B0442 putative ABC-type sugar transport system, periplasmic component [KO:K10439 ]
VIBNI_B0456 putative ABC-type sugar transport system, periplasmic component [KO:K10439 ]
VIBNI_A0673 putative Ribose ABC transport system, periplasmic ribose-binding protein RbsB [KO:K10439 ]
VIBNI_B2102 putative ABC-type sugar transport system, periplasmic component [KO:K10439 ]
VIBNI_B0720 putative ABC-type sugar transport system, periplasmic component [KO:K10439 ]
VIBNI_A2067 putative ABC-type sugar transport system, periplasmic component [KO:K10439 ]
VIBNI_A1883 putative ABC-type sugar transport system, periplasmic component [KO:K10439 ]
VIBNI_A2591 putative ABC-type sugar transport system, periplasmic component [KO:K10439 ]
VIBNI_B0995 putative ABC-type sugar transport system, periplasmic component [KO:K10439 ]
VIBNI_A1134 putative Ribose ABC transport system, periplasmic ribose-binding protein RbsB [KO:K10439 ]
VIBNI_A1543 putative ABC-type sugar transport system, periplasmic component [KO:K10439 ]
VIBNI_A1035 putative ABC-type sugar transport system, periplasmic component [KO:K10439 ]
VIBNI_B1794 putative ABC-type sugar transport system, periplasmic component [KO:K10439 ]
VIBNI_A0483 putative ABC-type sugar transport system, periplasmic component [KO:K10439 ]
VIBNI_A0789 putative ABC-type sugar transport system, periplasmic component [KO:K10439 ]
VIBNI_B2036 putative ABC-type sugar transport system, periplasmic component [KO:K10439 ]
VIBNI_A0251 putative ABC-type branched-chain amino acid transport system, permease component [KO:K10440 ]
VIBNI_A0253 putative ABC-type branched-chain amino acid transport system, permease component [KO:K10440 ]
VIBNI_B2035 putative Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease component [KO:K10440 ]
VIBNI_B2037 putative Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease component [KO:K10440 ]
VIBNI_B0457 putative Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease component [KO:K10440 ]
VIBNI_B0459 putative Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease component [KO:K10440 ]
VIBNI_B2104 putative Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease component [KO:K10440 ]
VIBNI_A2588 putative Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component [KO:K10440 ]
VIBNI_A2589 putative Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component [KO:K10440 ]
VIBNI_A0485 putative Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component [KO:K10440 ]
VIBNI_A0486 putative Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component [KO:K10440 ]
VIBNI_B0445 putative Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease component [KO:K10440 ]
VIBNI_B0752 putative ABC-type branched-chain amino acid transport system, permease component [KO:K10440 ]
VIBNI_A1761 putative ABC-type arabinose transport system, periplasmic component araF [KO:K10537 ]
VIBNI_B0973 putative ABC-type xylose transport system, periplasmic component [KO:K10543 ]
VIBNI_B0975 putative Amino acid or sugar ABC transport system, permease protein [KO:K10544 ]
VIBNI_A1131 frcB; Fructose ABC transporter, substrate-binding component FrcB [KO:K10552 ]
VIBNI_A0474 putative Ribose ABC transport system, periplasmic ribose-binding protein RbsB [KO:K17202 ]
VIBNI_A0472 putative ABC-type sugar transport system protein, ATPase component [KO:K17204 ]
VIBNI_A0467 putative ABC-type sugar transport system, periplasmic component [KO:K17205 ]
VIBNI_B1719 Putative ABC-type sugar transport system, periplasmic component [KO:K17321 ]
VIBNI_B1011 putative ABC-type sugar transport system, periplasmic component [KO:K05813 ]
VIBNI_B1010 putative ABC-type sugar transport systems, permease component [KO:K05814 ]
VIBNI_B1009 putative ABC-type sugar transport systems, permease component [KO:K05815 ]
VIBNI_A0407 pstS; Phosphate ABC transporter, periplasmic phosphate-binding protein, PstS [KO:K02040 ]
VIBNI_B0212 putative ABC-type phosphate transport system, periplasmic component [KO:K02040 ]
VIBNI_B0213 putative ABC-type phosphate transport system, permease component [KO:K02037 ]
VIBNI_B0959 pstC; Phosphate transport system permease ABC transporter protein [KO:K02037 ]
VIBNI_B0960 pstA; Phosphate transport system permease ABC transporter protein [KO:K02038 ]
VIBNI_A0027 phnE; putative phosphonates transport system permease protein phnE [KO:K02042 ]
VIBNI_A1807 aapQ; General L-amino acid transport system permease protein aapQ [KO:K09970 ]
VIBNI_A1808 aapM; General L-amino acid transport system permease protein aapM [KO:K09971 ]
VIBNI_A3891 putative ABC-type amino acid transport/signal transduction systems, periplasmic component [KO:K16961 ]
VIBNI_A3890 putative ABC-type amino acid transport system, permease component [KO:K16962 ]
VIBNI_A1100 putative Lysine-arginine-ornithine-binding periplasmic protein [KO:K10022 ]
VIBNI_B0870 putative LivK, ABC-type branched-chain amino acid transport systems, periplasmic component [KO:K01999 ]
VIBNI_A1221 putative ABC-type branched-chain amino acid transport systems, periplasmic component [KO:K01999 ]
VIBNI_A1219 putative ABC-type branched-chain amino acid transport system, permease component [KO:K01997 ]
VIBNI_A1220 putative ABC-type branched-chain amino acid transport system, permease component [KO:K01998 ]
VIBNI_A1218 Putative branched-chain amino acid transport ATP-binding protein [KO:K01995 ]
VIBNI_A1222 braG; High-affinity branched-chain amino acid transport ATP-binding protein braG [KO:K01996 ]
VIBNI_B0605 putative ABC-type urea transport system, periplasmic component UrtA [KO:K11959 ]
VIBNI_B0602 putative ABC-type urea transport system, ATP-binding protein UrtD [KO:K11962 ]
VIBNI_B0601 putative ABC-type urea transport system, ATP-binding protein UrtE [KO:K11963 ]
VIBNI_A1119 putative ABC-type oligopeptide/dipeptide transport system, periplasmic component [KO:K13893 ]
VIBNI_B1354 putative ABC-type oligopeptide/dipeptide transport system, periplasmic component [KO:K13893 ]
VIBNI_A1117 putative ABC-type dipeptide/oligopeptide transport systems, permease component [KO:K13894 ]
VIBNI_B1355 putative ABC-type dipeptide/oligopeptide/nickel transport systems, permease component [KO:K13894 ]
VIBNI_B1356 putative ABC-type dipeptide/oligopeptide/nickel transport system, permease component [KO:K13895 ]
VIBNI_B1357 putative ABC-type dipeptide/oligopeptide/nickel transport system, duplicated ATPase component [KO:K13896 ]
VIBNI_B2157 fecD; Fe(3+) dicitrate transport system permease protein FecD [KO:K23182 ]
VIBNI_B2156 pvuC; Ferric vibrioferrin transport system permease protein PvuC [KO:K23183 ]
VIBNI_B0626 viuP; Ferric vibriobactin ABC transporter, periplasmic ferric vibriobactin-binding protein [KO:K23185 ]
VIBNI_A0828 putative ABC-type Fe3+-hydroxamate transport system, periplasmic component [KO:K23227 ]
VIBNI_A0827 putative ABC-type Fe3+-siderophore transport system, permease component [KO:K23228 ]
VIBNI_A0266 putative ABC-type Fe3+-hydroxamate transport system, periplasmic component [KO:K06858 ]
VIBNI_A2168 putative ABC-type cobalt transport system, permease component CbiQ [KO:K16783 ]
VIBNI_A2167 putative ABC-type cobalt transport system, ATPase component [KO:K16784 ] [EC:7.6.2.-]
VIBNI_B0771 putative ABC-type cobalt transport system, permease component [KO:K16785 ]
VIBNI_A3642 putative ABC-type polysaccharide/polyol phosphate export systems, permease component [KO:K09690 ]
VIBNI_A1073 lolC; Lipoprotein-releasing system transmembrane protein lolC [KO:K09808 ]
VIBNI_A1075 lolE; Lipoprotein-releasing system transmembrane protein lolE [KO:K09808 ]
VIBNI_A1074 lolD; Lipoprotein-releasing system ATP-binding protein LolD [KO:K09810 ] [EC:7.6.2.-]
VIBNI_B0024 putative ATPase, type I secretion system (ABC TRANSPORTER, TOXIN SECRETION (HEMOLYSIN B)) [KO:K12541 ]
VIBNI_B1603 putative COLICIN V SECRETION ABC TRANSPORTER, ATPase and permease component [KO:K12536 ]
Compound
C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference
Authors
Tomii K, Kanehisa M.
Title
A comparative analysis of ABC transporters in complete microbial genomes.
Journal
Reference
Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal
Reference
Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal
Reference
Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal
Reference
Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal
Reference
Authors
Richard-Fogal CL, Frawley ER, Kranz RG
Title
Topology and function of CcmD in cytochrome c maturation.
Journal
Reference
Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal
Reference
Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal
Reference
Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal
Reference
Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal
KO pathway
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