KEGG   PATHWAY: vst00630
Entry
vst00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Vitreoscilla stercoraria
Class
Metabolism; Carbohydrate metabolism
Pathway map
vst00630  Glyoxylate and dicarboxylate metabolism
vst00630

Module
vst_M00012  Glyoxylate cycle [PATH:vst00630]
vst_M00621  Glycine cleavage system [PATH:vst00630]
Other DBs
GO: 0046487 0043648
Organism
Vitreoscilla stercoraria [GN:vst]
Gene
LVJ81_01440  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
LVJ81_08140  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
LVJ81_04250  malate synthase G [KO:K01638] [EC:2.3.3.9]
LVJ81_01280  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
LVJ81_01315  gltA; citrate synthase [KO:K01647] [EC:2.3.3.1]
LVJ81_04445  acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
LVJ81_07255  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
LVJ81_08000  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
LVJ81_09590  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
LVJ81_09595  glcE; glycolate oxidase subunit GlcE [KO:K11472] [EC:1.1.99.14]
LVJ81_09600  glcF; glycolate oxidase subunit GlcF [KO:K11473] [EC:1.1.99.14]
LVJ81_12815  D-2-hydroxyacid dehydrogenase [KO:K00018] [EC:1.1.1.29]
LVJ81_03180  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
LVJ81_07035  HAD hydrolase-like protein [KO:K01091] [EC:3.1.3.18]
LVJ81_11180  HAD-IA family hydrolase [KO:K01091] [EC:3.1.3.18]
LVJ81_02525  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
LVJ81_04360  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
LVJ81_07870  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
LVJ81_08525  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
LVJ81_06685  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
LVJ81_09355  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
LVJ81_12005  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
LVJ81_12035  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
LVJ81_01170  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
LVJ81_01335  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
LVJ81_04400  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
LVJ81_12030  gcvH; glycine cleavage system protein GcvH [KO:K02437]
LVJ81_07560  glycerate kinase [KO:K11529] [EC:2.7.1.165]
LVJ81_09290  alpha/beta hydrolase [KO:K01432] [EC:3.5.1.9]
LVJ81_05590  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
LVJ81_06680  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
LVJ81_12055  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
vst00010  Glycolysis / Gluconeogenesis
vst00020  Citrate cycle (TCA cycle)
vst00030  Pentose phosphate pathway
vst00071  Fatty acid degradation
vst00230  Purine metabolism
vst00250  Alanine, aspartate and glutamate metabolism
vst00260  Glycine, serine and threonine metabolism
vst00620  Pyruvate metabolism
vst00710  Carbon fixation by Calvin cycle
vst00750  Vitamin B6 metabolism
vst00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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