Entry
Name
Glyoxylate and dicarboxylate metabolism - Xenorhabdus nematophila ATCC 19061
Class
Metabolism; Carbohydrate metabolism
BRITE hierarchy
Pathway map
xne00630 Glyoxylate and dicarboxylate metabolism
Ortholog table
Module
Other DBs
Organism
Xenorhabdus nematophila ATCC 19061 [GN:
xne ]
Gene
XNC1_1110 gcvP; glycine cleavage complex protein P, glycine decarboxylase, PLP-dependent [KO:K00281 ] [EC:1.4.4.2 ]
XNC1_1108 gcvT; glycine cleavage complex protein T, aminomethyltransferase, tetrahydrofolate-dependent [KO:K00605 ] [EC:2.1.2.10 ]
XNC1_1082 lpd; dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes [KO:K00382 ] [EC:1.8.1.4 ]
XNC1_1109 gcvH; glycine cleavage complex protein H, carrier of aminomethyl moiety via covalently bound lipoyl cofactor [KO:K02437 ]
XNC1_3946 eda; multifunctional: 2-keto-3-deoxygluconate 6-phosphate aldolase; 2-keto-4-hydroxyglutarate aldolase; oxaloacetate decarboxylase [KO:K01625 ] [EC:4.1.2.14 4.1.3.42 ]
Compound
C01127 4-Hydroxy-2-oxoglutarate
C01146 2-Hydroxy-3-oxopropanoate
C01182 D-Ribulose 1,5-bisphosphate
C03459 2-Hydroxy-3-oxosuccinate
C03548 trans-2,3-Epoxysuccinate
C03561 (R)-3-Hydroxybutanoyl-CoA
C03618 L-threo-3-Methylaspartate
C06027 L-erythro-3-Methylmalyl-CoA
C18324 (2S)-Methylsuccinyl-CoA
Reference
Authors
Njau RK, Herndon CA, Hawes JW.
Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
Journal
Reference
Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
Journal
Reference
Authors
Erb TJ, Retey J, Fuchs G, Alber BE
Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
Journal
Reference
Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
Journal
Reference
Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
Journal
Reference
Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
Title
A methylaspartate cycle in haloarchaea.
Journal
Reference
Authors
Serrano JA, Bonete MJ
Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
Journal
Related pathway
xne00053 Ascorbate and aldarate metabolism
xne00250 Alanine, aspartate and glutamate metabolism
xne00260 Glycine, serine and threonine metabolism
xne00710 Carbon fixation by Calvin cycle
KO pathway
LinkDB
All DBs