KEGG   PATHWAY: pbry00970
Entry
pbry00970                   Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Paraburkholderia bryophila
Class
Genetic Information Processing; Translation
Pathway map
pbry00970  Aminoacyl-tRNA biosynthesis
pbry00970

Organism
Paraburkholderia bryophila [GN:pbry]
Gene
NDK50_00280  [KO:K14229]
NDK50_00335  fmt; methionyl-tRNA formyltransferase [KO:K00604] [EC:2.1.2.9]
NDK50_00370  [KO:K14231]
NDK50_00430  gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC [KO:K02435] [EC:6.3.5.6 6.3.5.7]
NDK50_00435  gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA [KO:K02433] [EC:6.3.5.6 6.3.5.7]
NDK50_00440  gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [KO:K02434] [EC:6.3.5.6 6.3.5.7]
NDK50_01250  argS; arginine--tRNA ligase [KO:K01887] [EC:6.1.1.19]
NDK50_01885  [KO:K14223]
NDK50_02260  aspS; aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
NDK50_02420  glyS; glycine--tRNA ligase subunit beta [KO:K01879] [EC:6.1.1.14]
NDK50_02425  glyQ; glycine--tRNA ligase subunit alpha [KO:K01878] [EC:6.1.1.14]
NDK50_04030  metG; methionine--tRNA ligase [KO:K01874] [EC:6.1.1.10]
NDK50_04225  serS; serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
NDK50_04650  [KO:K14219]
NDK50_05325  [KO:K14228]
NDK50_05835  [KO:K14233]
NDK50_06340  [KO:K01884] [EC:6.1.1.16]
NDK50_07410  [KO:K14228]
NDK50_07415  [KO:K14228]
NDK50_07685  [KO:K14230]
NDK50_08310  [KO:K14226]
NDK50_08530  [KO:K00604] [EC:2.1.2.9]
NDK50_08950  [KO:K14228]
NDK50_09005  [KO:K14221]
NDK50_12245  [KO:K14221]
NDK50_12250  [KO:K14224]
NDK50_12255  [KO:K14221]
NDK50_12265  [KO:K14218]
NDK50_12270  gltX; glutamate--tRNA ligase [KO:K01885] [EC:6.1.1.17]
NDK50_12940  [KO:K14233]
NDK50_12965  cysS; cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
NDK50_13130  hisS; histidine--tRNA ligase [KO:K01892] [EC:6.1.1.21]
NDK50_13180  [KO:K01867] [EC:6.1.1.2]
NDK50_13295  lysS; lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
NDK50_13445  [KO:K14230]
NDK50_13695  [KO:K14228]
NDK50_14295  pheT; phenylalanine--tRNA ligase subunit beta [KO:K01890] [EC:6.1.1.20]
NDK50_14300  pheS; phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
NDK50_14320  thrS; threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
NDK50_14325  [KO:K14237]
NDK50_14520  [KO:K01873] [EC:6.1.1.9]
NDK50_14690  alaS; alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
NDK50_14710  [KO:K01886] [EC:6.1.1.18]
NDK50_15205  [KO:K14219]
NDK50_15265  [KO:K14232]
NDK50_15400  [KO:K14237]
NDK50_15485  [KO:K14222]
NDK50_15490  [KO:K14225]
NDK50_15495  [KO:K14225]
NDK50_15735  [KO:K14220]
NDK50_15740  [KO:K14220]
NDK50_16255  [KO:K02433] [EC:6.3.5.6 6.3.5.7]
NDK50_16470  [KO:K14219]
NDK50_16525  [KO:K14233]
NDK50_16655  [KO:K14225]
NDK50_16685  [KO:K14228]
NDK50_16885  ileS; isoleucine--tRNA ligase [KO:K01870] [EC:6.1.1.5]
NDK50_17580  [KO:K14230]
NDK50_17880  tyrS; tyrosine--tRNA ligase [KO:K01866] [EC:6.1.1.1]
NDK50_18030  leuS; leucine--tRNA ligase [KO:K01869] [EC:6.1.1.4]
NDK50_18325  [KO:K01881] [EC:6.1.1.15]
NDK50_18365  [KO:K14232]
NDK50_18645  [KO:K14227]
NDK50_18940  [KO:K14234]
NDK50_19565  [KO:K14225]
NDK50_22025  thrS; threonine--tRNA ligase [KO:K01868] [EC:6.1.1.3]
NDK50_26365  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
NDK50_29490  cysS; cysteine--tRNA ligase [KO:K01883] [EC:6.1.1.16]
NDK50_34285  [KO:K14238]
NDK50_34295  selA; L-seryl-tRNA(Sec) selenium transferase [KO:K01042] [EC:2.9.1.1]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
pbry00250  Alanine, aspartate and glutamate metabolism
pbry00260  Glycine, serine and threonine metabolism
pbry00270  Cysteine and methionine metabolism
pbry00290  Valine, leucine and isoleucine biosynthesis
pbry00300  Lysine biosynthesis
pbry00330  Arginine and proline metabolism
pbry00340  Histidine metabolism
pbry00380  Tryptophan metabolism
pbry00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

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