KEGG   PATHWAY: pbu00010
Entry
pbu00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Sedimentisphaera cyanobacteriorum L21-RPul-D3
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
pbu00010  Glycolysis / Gluconeogenesis
pbu00010

Module
pbu_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pbu00010]
Other DBs
GO: 0006096 0006094
Organism
Sedimentisphaera cyanobacteriorum L21-RPul-D3 [GN:pbu]
Gene
L21SP3_00070  pfp_1; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
L21SP3_00429  nifJ; Pyruvate-flavodoxin oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
L21SP3_00501  adhE; Aldehyde-alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
L21SP3_00553  eno; Enolase [KO:K01689] [EC:4.2.1.11]
L21SP3_00618  pfkA1; 6-phosphofructokinase 1 [KO:K00850] [EC:2.7.1.11]
L21SP3_00625  glcK_1; Glucokinase [KO:K25026]
L21SP3_00655  acsA; Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
L21SP3_00658  nagK_1; N-acetyl-D-glucosamine kinase [KO:K25026]
L21SP3_00677  pfkA; 6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
L21SP3_00711  pdhC_1; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex [KO:K00627] [EC:2.3.1.12]
L21SP3_00817  gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
L21SP3_01006  pgi; Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
L21SP3_01022  pfp_2; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
L21SP3_01115  fbaB; Fructose-bisphosphate aldolase class 1 [KO:K11645] [EC:4.1.2.13]
L21SP3_01140  mro_1; Aldose 1-epimerase precursor [KO:K01785] [EC:5.1.3.3]
L21SP3_01282  [KO:K00382] [EC:1.8.1.4]
L21SP3_01328  gap; Glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
L21SP3_01407  glcK_2; Glucokinase [KO:K25026]
L21SP3_01597  fba; Fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
L21SP3_01717  mro_2; Aldose 1-epimerase precursor [KO:K01785] [EC:5.1.3.3]
L21SP3_01725  pgk_tpi_2; Bifunctional PGK/TIM [KO:K01803] [EC:5.3.1.1]
L21SP3_01813  korB_2; 2-oxoglutarate oxidoreductase subunit KorB [KO:K00175] [EC:1.2.7.3 1.2.7.11]
L21SP3_01814  korA_2; 2-oxoglutarate oxidoreductase subunit KorA [KO:K00174] [EC:1.2.7.3 1.2.7.11]
L21SP3_01876  [KO:K15635] [EC:5.4.2.12]
L21SP3_01964  lpd; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
L21SP3_02102  ppdK; Pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
L21SP3_02130  nagK_2; N-acetyl-D-glucosamine kinase [KO:K25026]
L21SP3_02150  pdhC_2; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex [KO:K00627] [EC:2.3.1.12]
L21SP3_02229  pckG; Phosphoenolpyruvate carboxykinase (GTP) [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
pbu00020  Citrate cycle (TCA cycle)
pbu00030  Pentose phosphate pathway
pbu00500  Starch and sucrose metabolism
pbu00620  Pyruvate metabolism
pbu00640  Propanoate metabolism
pbu00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   

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