KEGG   PATHWAY: plh00010
Entry
plh00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Planctomyces sp. SH-PL62
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
plh00010  Glycolysis / Gluconeogenesis
plh00010

Module
plh_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:plh00010]
plh_M00002  Glycolysis, core module involving three-carbon compounds [PATH:plh00010]
plh_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:plh00010]
plh_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:plh00010]
Other DBs
GO: 0006096 0006094
Organism
Planctomyces sp. SH-PL62 [GN:plh]
Gene
VT85_12290  glcK_2; Glucokinase [KO:K25026] [EC:2.7.1.2]
VT85_18300  glcK_3; Glucokinase [KO:K25026] [EC:2.7.1.2]
VT85_06855  glcK_1; Glucokinase [KO:K25026] [EC:2.7.1.2]
VT85_02065  pgi; Glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
VT85_05195  pfp_2; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [KO:K00850] [EC:2.7.1.11]
VT85_16205  pfkA1_1; 6-phosphofructokinase 1 [KO:K21071] [EC:2.7.1.11 2.7.1.90]
VT85_01795  pfp_1; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
VT85_18460  pfkA1_2; 6-phosphofructokinase 1 [KO:K21071] [EC:2.7.1.11 2.7.1.90]
VT85_16865  glpX; Fructose-1,6-bisphosphatase class 2 [KO:K02446] [EC:3.1.3.11]
VT85_00870  fbaB; Fructose-bisphosphate aldolase class 1 [KO:K11645] [EC:4.1.2.13]
VT85_22975  tpiA; Triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
VT85_19805  gap; Glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
VT85_19810  pgk_tpi; Bifunctional PGK/TIM [KO:K00927] [EC:2.7.2.3]
VT85_25980  gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
VT85_15150  pspA_1; Phosphoserine phosphatase 1 [KO:K15634] [EC:5.4.2.11]
VT85_13820  cofactor-independent phosphoglycerate mutase [KO:K15635] [EC:5.4.2.12]
VT85_17940  eno_1; Enolase [KO:K01689] [EC:4.2.1.11]
VT85_23460  eno_2; Enolase [KO:K01689] [EC:4.2.1.11]
VT85_00650  pyk; Pyruvate kinase [KO:K00873] [EC:2.7.1.40]
VT85_18005  ppdK; Pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
VT85_21005  acoA; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [KO:K00161] [EC:1.2.4.1]
VT85_21000  bfmBAB; 2-oxoisovalerate dehydrogenase subunit beta [KO:K00162] [EC:1.2.4.1]
VT85_20995  pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex [KO:K00627] [EC:2.3.1.12]
VT85_20990  lpd3; Dihydrolipoyl dehydrogenase 3 [KO:K00382] [EC:1.8.1.4]
VT85_09335  lpd; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
VT85_05265  nifJ; Pyruvate-flavodoxin oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
VT85_11380  ldh; L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
VT85_12500  gbsA; Betaine aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
VT85_06645  acsA; Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
VT85_06555  mro; Aldose 1-epimerase precursor [KO:K01785] [EC:5.1.3.3]
VT85_24555  galM; Aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
VT85_18420  yihX; Alpha-D-glucose-1-phosphate phosphatase YihX [KO:K20866] [EC:3.1.3.10]
VT85_16070  pgcA; Phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
VT85_15935  pckA; Phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
plh00020  Citrate cycle (TCA cycle)
plh00030  Pentose phosphate pathway
plh00500  Starch and sucrose metabolism
plh00620  Pyruvate metabolism
plh00640  Propanoate metabolism
plh00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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