KEGG   PATHWAY: por00630
Entry
por00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Pseudomonas oryzihabitans
Class
Metabolism; Carbohydrate metabolism
Pathway map
por00630  Glyoxylate and dicarboxylate metabolism
por00630

Module
por_M00621  Glycine cleavage system [PATH:por00630]
Other DBs
GO: 0046487 0043648
Organism
Pseudomonas oryzihabitans [GN:por]
Gene
APT59_15525  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
APT59_09065  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
APT59_05685  acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
APT59_02040  acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
APT59_21220  malate synthase G [KO:K01638] [EC:2.3.3.9]
APT59_06955  gltA; type II citrate synthase [KO:K01647] [EC:2.3.3.1]
APT59_09450  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
APT59_09515  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
APT59_11805  aconitate hydratase B [KO:K01682] [EC:4.2.1.3 4.2.1.99]
APT59_08975  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
APT59_07925  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
APT59_21390  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
APT59_09445  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
APT59_08670  3-hydroxybutyryl-CoA dehydratase [KO:K17865] [EC:4.2.1.55]
APT59_21240  glycolate oxidase subunit GlcD [KO:K00104] [EC:1.1.99.14]
APT59_21235  glcE; glycolate oxidase [KO:K11472] [EC:1.1.99.14]
APT59_21230  glcF; glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
APT59_19935  catalase [KO:K03781] [EC:1.11.1.6]
APT59_21200  katE; catalase HPII [KO:K03781] [EC:1.11.1.6]
APT59_10590  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
APT59_03840  D-glycerate dehydrogenase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
APT59_03530  glycerate dehydrogenase [KO:K00018] [EC:1.1.1.29]
APT59_15870  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
APT59_00350  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
APT59_01970  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
APT59_21415  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
APT59_10740  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
APT59_12900  gamma-glutamylputrescine synthetase [KO:K01915] [EC:6.3.1.2]
APT59_18075  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
APT59_18085  gamma-glutamylputrescine synthetase [KO:K01915] [EC:6.3.1.2]
APT59_20460  glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
APT59_03565  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
APT59_21565  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
APT59_00940  glycine dehydrogenase (aminomethyl-transferring) [KO:K00281] [EC:1.4.4.2]
APT59_00945  gcvT; glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
APT59_08995  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
APT59_06990  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
APT59_18460  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
APT59_00935  glycine cleavage system protein H [KO:K02437]
APT59_20255  glycine cleavage system protein H [KO:K02437]
APT59_10520  glycerate kinase [KO:K00865] [EC:2.7.1.165]
APT59_11885  aldehyde dehydrogenase [KO:K07248] [EC:1.2.1.22 1.2.1.21]
APT59_00645  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
APT59_11580  keto-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
APT59_16690  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
APT59_16695  sulfate ABC transporter substrate-binding protein [KO:K00123] [EC:1.17.1.9]
APT59_16685  formate dehydrogenase [KO:K00124]
APT59_16680  formate dehydrogenase [KO:K00127]
APT59_21540  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
APT59_17095  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
por00010  Glycolysis / Gluconeogenesis
por00020  Citrate cycle (TCA cycle)
por00030  Pentose phosphate pathway
por00053  Ascorbate and aldarate metabolism
por00071  Fatty acid degradation
por00230  Purine metabolism
por00250  Alanine, aspartate and glutamate metabolism
por00260  Glycine, serine and threonine metabolism
por00620  Pyruvate metabolism
por00710  Carbon fixation by Calvin cycle
por00750  Vitamin B6 metabolism
por00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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