KEGG   PATHWAY: prd00010
Entry
prd00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Pradoshia sp. D12
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
prd00010  Glycolysis / Gluconeogenesis
prd00010

Module
prd_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:prd00010]
prd_M00002  Glycolysis, core module involving three-carbon compounds [PATH:prd00010]
prd_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:prd00010]
prd_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:prd00010]
Other DBs
GO: 0006096 0006094
Organism
Pradoshia sp. D12 [GN:prd]
Gene
F7984_12310  ROK family glucokinase [KO:K25026] [EC:2.7.1.2]
F7984_13555  ROK family glucokinase [KO:K25026] [EC:2.7.1.2]
F7984_16145  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
F7984_15175  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
F7984_03895  glpX; class II fructose-bisphosphatase [KO:K02446] [EC:3.1.3.11]
F7984_10070  fructose-bisphosphatase class III [KO:K04041] [EC:3.1.3.11]
F7984_18145  fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
F7984_17000  triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
F7984_17010  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
F7984_15105  glyceraldehyde-3-phosphate dehydrogenase [KO:K00150] [EC:1.2.1.59]
F7984_17005  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
F7984_08030  histidine phosphatase family protein [KO:K01834] [EC:5.4.2.11]
F7984_16995  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
F7984_16990  phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
F7984_15170  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
F7984_09915  pyruvate, phosphate dikinase [KO:K01006] [EC:2.7.9.1]
F7984_06070  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
F7984_06075  alpha-ketoacid dehydrogenase subunit beta [KO:K00162] [EC:1.2.4.1]
F7984_06080  2-oxo acid dehydrogenase subunit E2 [KO:K00627] [EC:2.3.1.12]
F7984_13170  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
F7984_06085  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
F7984_05885  pyruvate synthase [KO:K00169] [EC:1.2.7.1]
F7984_05880  4Fe-4S dicluster domain-containing protein [KO:K00172] [EC:1.2.7.1]
F7984_07230  2-oxoacid:acceptor oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
F7984_07235  2-oxoacid:ferredoxin oxidoreductase subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
F7984_13575  L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
F7984_08450  L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
F7984_03005  glutathione-dependent formaldehyde dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
F7984_16465  adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
F7984_02545  adhP; alcohol dehydrogenase AdhP [KO:K13953] [EC:1.1.1.1]
F7984_10235  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
F7984_07745  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
F7984_02530  aldehyde dehydrogenase family protein [KO:K00138] [EC:1.2.1.-]
F7984_15320  acyl--CoA ligase [KO:K01895] [EC:6.2.1.1]
F7984_15395  acsA; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
F7984_08765  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
F7984_09390  acyl--CoA ligase [KO:K01895] [EC:6.2.1.1]
F7984_10125  galactose mutarotase [KO:K01785] [EC:5.1.3.3]
F7984_03505  phospho-sugar mutase [KO:K01835] [EC:5.4.2.2]
F7984_15660  pckA; phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
F7984_01650  glycoside hydrolase family 1 protein [KO:K01223] [EC:3.2.1.86]
F7984_12620  glycoside hydrolase family 1 protein [KO:K01223] [EC:3.2.1.86]
F7984_10545  glycoside hydrolase family 1 protein [KO:K01223] [EC:3.2.1.86]
F7984_08515  glycoside hydrolase family 1 protein [KO:K01223] [EC:3.2.1.86]
F7984_16785  PTS glucose transporter subunit IIA [KO:K02777] [EC:2.7.1.-]
F7984_01795  PTS glucose transporter subunit IICBA [KO:K20118] [EC:2.7.1.199]
F7984_08470  PTS sugar transporter subunit IIABC [KO:K20118] [EC:2.7.1.199]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
prd00020  Citrate cycle (TCA cycle)
prd00030  Pentose phosphate pathway
prd00500  Starch and sucrose metabolism
prd00620  Pyruvate metabolism
prd00640  Propanoate metabolism
prd00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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