KEGG   PATHWAY: prd00330
Entry
prd00330                    Pathway                                
Name
Arginine and proline metabolism - Pradoshia sp. D12
Class
Metabolism; Amino acid metabolism
Pathway map
prd00330  Arginine and proline metabolism
prd00330

Module
prd_M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:prd00330]
prd_M00970  Proline degradation, proline => glutamate [PATH:prd00330]
prd_M00972  Proline metabolism [PATH:prd00330]
Other DBs
GO: 0006525 0006560
Organism
Pradoshia sp. D12 [GN:prd]
Gene
F7984_03235  codA; cytosine deaminase [KO:K01485] [EC:3.5.4.1 3.5.4.21]
F7984_05180  aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme [KO:K01585] [EC:4.1.1.19]
F7984_18220  speB; agmatinase [KO:K01480] [EC:3.5.3.11]
F7984_05190  saccharopine dehydrogenase family protein [KO:K27502] [EC:1.5.1.55]
F7984_05195  nspC; carboxynorspermidine decarboxylase [KO:K27684] [EC:4.1.1.127]
F7984_18225  speE; polyamine aminopropyltransferase [KO:K00797] [EC:2.5.1.16]
F7984_05185  speE; polyamine aminopropyltransferase [KO:K00797] [EC:2.5.1.16]
F7984_15100  S-adenosylmethionine decarboxylase proenzyme [KO:K01611] [EC:4.1.1.50]
F7984_10235  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
F7984_07745  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
F7984_08040  amidase [KO:K01426] [EC:3.5.1.4]
F7984_16160  ornithine--oxo-acid transaminase [KO:K00819] [EC:2.6.1.13]
F7984_12770  proC; pyrroline-5-carboxylate reductase [KO:K00286] [EC:1.5.1.2]
F7984_09745  proC; pyrroline-5-carboxylate reductase [KO:K00286] [EC:1.5.1.2]
F7984_12710  proline dehydrogenase [KO:K00318] [EC:1.5.5.2]
F7984_01935  pruA; L-glutamate gamma-semialdehyde dehydrogenase [KO:K00294] [EC:1.2.1.88]
F7984_01770  alpha/beta fold hydrolase [KO:K01259] [EC:3.4.11.5]
F7984_04290  alpha/beta hydrolase [KO:K01259] [EC:3.4.11.5]
F7984_14685  alpha/beta hydrolase [KO:K01259] [EC:3.4.11.5]
F7984_08770  2OG-Fe(II) oxygenase [KO:K00472] [EC:1.14.11.2]
F7984_11340  pyridoxal phosphate-dependent aminotransferase [KO:K00812] [EC:2.6.1.1]
F7984_15540  dat; D-amino-acid transaminase [KO:K00824] [EC:2.6.1.21]
Compound
C00012  Peptide
C00019  S-Adenosyl-L-methionine
C00022  Pyruvate
C00025  L-Glutamate
C00048  Glyoxylate
C00062  L-Arginine
C00077  L-Ornithine
C00086  Urea
C00134  Putrescine
C00148  L-Proline
C00179  Agmatine
C00213  Sarcosine
C00223  p-Coumaroyl-CoA
C00300  Creatine
C00315  Spermidine
C00334  4-Aminobutanoate
C00406  Feruloyl-CoA
C00431  5-Aminopentanoate
C00436  N-Carbamoylputrescine
C00441  L-Aspartate 4-semialdehyde
C00533  Nitric oxide
C00555  4-Aminobutyraldehyde
C00581  Guanidinoacetate
C00750  Spermine
C00763  D-Proline
C00791  Creatinine
C00884  Homocarnosine
C00986  1,3-Diaminopropane
C01035  4-Guanidinobutanoate
C01043  N-Carbamoylsarcosine
C01110  5-Amino-2-oxopentanoic acid
C01137  S-Adenosylmethioninamine
C01157  Hydroxyproline
C01165  L-Glutamate 5-semialdehyde
C01250  N-Acetyl-L-glutamate 5-semialdehyde
C01682  Nopaline
C02305  Phosphocreatine
C02565  N-Methylhydantoin
C02647  4-Guanidinobutanal
C02714  N-Acetylputrescine
C02946  4-Acetamidobutanoate
C03078  4-Guanidinobutanamide
C03166  Phosphoguanidinoacetate
C03287  L-Glutamyl 5-phosphate
C03296  N2-Succinyl-L-arginine
C03375  Norspermidine
C03415  N2-Succinyl-L-ornithine
C03564  1-Pyrroline-2-carboxylate
C03771  5-Guanidino-2-oxopentanoate
C03912  (S)-1-Pyrroline-5-carboxylate
C04137  Octopine
C04281  L-1-Pyrroline-3-hydroxy-5-carboxylate
C05147  trans-3-Hydroxy-L-proline
C05931  N-Succinyl-L-glutamate
C05932  N-Succinyl-L-glutamate 5-semialdehyde
C05933  N(omega)-Hydroxyarginine
C05936  N4-Acetylaminobutanal
C05938  L-4-Hydroxyglutamate semialdehyde
C05945  L-Arginine phosphate
C05946  (4R)-4-Hydroxy-2-oxoglutarate
C05947  L-erythro-4-Hydroxyglutamate
C10497  Feruloylputrescine
C15699  gamma-L-Glutamylputrescine
C15700  gamma-Glutamyl-gamma-aminobutyraldehyde
C15767  4-(L-gamma-Glutamylamino)butanoate
C18172  Carboxyspermidine
C18174  Carboxynorspermidine
C18326  p-Coumaroylputrescine
C19706  cis-3-Hydroxy-L-proline
C20560  N1-(3-Aminopropyl)agmatine
C22886  N1-[(S)-3-amino-3-carboxypropyl]agmatine
Reference
PMID:5288244
  Authors
Haake P, Allen GW.
  Title
Studies on phosphorylation by phosphoroguanidinates. The mechanism of action of creatine: ATP transphosphorylase (creatine kinase).
  Journal
Proc Natl Acad Sci U S A 68:2691-3 (1971)
DOI:10.1073/pnas.68.11.2691
Reference
PMID:16499623
  Authors
Kurihara S, Oda S, Kumagai H, Suzuki H.
  Title
Gamma-glutamyl-gamma-aminobutyrate hydrolase in the putrescine utilization pathway of Escherichia coli K-12.
  Journal
FEMS Microbiol Lett 256:318-23 (2006)
DOI:10.1111/j.1574-6968.2006.00137.x
Reference
PMID:15590624
  Authors
Kurihara S, Oda S, Kato K, Kim HG, Koyanagi T, Kumagai H, Suzuki H.
  Title
A novel putrescine utilization pathway involves gamma-glutamylated intermediates of Escherichia coli K-12.
  Journal
J Biol Chem 280:4602-8 (2005)
DOI:10.1074/jbc.M411114200
Related
pathway
prd00020  Citrate cycle (TCA cycle)
prd00220  Arginine biosynthesis
prd00250  Alanine, aspartate and glutamate metabolism
prd00260  Glycine, serine and threonine metabolism
prd00270  Cysteine and methionine metabolism
prd00310  Lysine degradation
prd00410  beta-Alanine metabolism
prd00470  D-Amino acid metabolism
prd00480  Glutathione metabolism
prd00630  Glyoxylate and dicarboxylate metabolism
prd00650  Butanoate metabolism
prd00770  Pantothenate and CoA biosynthesis
KO pathway
ko00330   
LinkDB

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