KEGG   PATHWAY: rama00970
Entry
rama00970                   Pathway                                
Name
Aminoacyl-tRNA biosynthesis - Rothia amarae
Class
Genetic Information Processing; Translation
Pathway map
rama00970  Aminoacyl-tRNA biosynthesis
rama00970

Organism
Rothia amarae [GN:rama]
Gene
IDM48_00140  [KO:K14227]
IDM48_00145  [KO:K14218]
IDM48_00170  [KO:K14218]
IDM48_01110  [KO:K14224]
IDM48_01115  [KO:K14221]
IDM48_01120  [KO:K14231]
IDM48_01355  serS; serine--tRNA ligase [KO:K01875] [EC:6.1.1.11]
IDM48_01520  lysS; lysine--tRNA ligase [KO:K04567] [EC:6.1.1.6]
IDM48_01625  [KO:K14229]
IDM48_01725  [KO:K14233]
IDM48_01750  [KO:K14233]
IDM48_01755  [KO:K14233]
IDM48_01820  [KO:K14234]
IDM48_02150  [KO:K14219]
IDM48_02415  [KO:K14232]
IDM48_02695  gluQRS; tRNA glutamyl-Q(34) synthetase GluQRS [KO:K01885] [EC:6.1.1.17]
IDM48_02775  [KO:K14236]
IDM48_02800  [KO:K14234]
IDM48_02805  [KO:K14230]
IDM48_02810  [KO:K14234]
IDM48_02910  [KO:K14235]
IDM48_03980  [KO:K14230]
IDM48_04700  [KO:K14219]
IDM48_04705  [KO:K01887] [EC:6.1.1.19]
IDM48_04950  [KO:K14228]
IDM48_04965  [KO:K14229]
IDM48_04970  [KO:K14229]
IDM48_05000  [KO:K01874] [EC:6.1.1.10]
IDM48_05055  [KO:K01885] [EC:6.1.1.17]
IDM48_05060  [KO:K14223]
IDM48_05065  [KO:K14224]
IDM48_05095  [KO:K14224]
IDM48_05365  [KO:K14237]
IDM48_05415  [KO:K14226]
IDM48_05430  [KO:K14219]
IDM48_05485  [KO:K14225]
IDM48_05490  [KO:K14232]
IDM48_05545  valS; valine--tRNA ligase [KO:K01873] [EC:6.1.1.9]
IDM48_05605  [KO:K01870] [EC:6.1.1.5]
IDM48_05685  [KO:K14218]
IDM48_05785  [KO:K01868] [EC:6.1.1.3]
IDM48_05865  [KO:K01892] [EC:6.1.1.21]
IDM48_05870  aspS; aspartate--tRNA ligase [KO:K01876] [EC:6.1.1.12]
IDM48_05900  alaS; alanine--tRNA ligase [KO:K01872] [EC:6.1.1.7]
IDM48_06020  [KO:K01869] [EC:6.1.1.4]
IDM48_06325  [KO:K14228]
IDM48_06650  [KO:K14228]
IDM48_06820  [KO:K00604] [EC:2.1.2.9]
IDM48_06835  [KO:K14225]
IDM48_06840  [KO:K14237]
IDM48_06845  [KO:K14222]
IDM48_06850  [KO:K14225]
IDM48_07530  [KO:K14232]
IDM48_07660  [KO:K01866] [EC:6.1.1.1]
IDM48_07725  [KO:K01890] [EC:6.1.1.20]
IDM48_07730  pheS; phenylalanine--tRNA ligase subunit alpha [KO:K01889] [EC:6.1.1.20]
IDM48_08080  [KO:K01881] [EC:6.1.1.15]
IDM48_08185  [KO:K14230]
IDM48_08200  [KO:K14220]
IDM48_08255  [KO:K01880] [EC:6.1.1.14]
IDM48_08295  gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB [KO:K02434] [EC:6.3.5.6 6.3.5.7]
IDM48_08300  gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA [KO:K02433] [EC:6.3.5.6 6.3.5.7]
IDM48_08305  gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC [KO:K02435] [EC:6.3.5.6 6.3.5.7]
IDM48_08755  [KO:K14223]
IDM48_08980  [KO:K14228]
IDM48_09100  trpS; tryptophan--tRNA ligase [KO:K01867] [EC:6.1.1.2]
IDM48_09315  [KO:K14225]
IDM48_09430  [KO:K14234]
IDM48_09490  [KO:K01883] [EC:6.1.1.16]
IDM48_09625  [KO:K14219]
IDM48_09820  [KO:K14233]
IDM48_10685  lysX; bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX [KO:K04567] [EC:6.1.1.6]
IDM48_10960  [KO:K14228]
IDM48_11285  [KO:K14222]
Compound
C00025  L-Glutamate
C00037  Glycine
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00073  L-Methionine
C00078  L-Tryptophan
C00079  L-Phenylalanine
C00082  L-Tyrosine
C00097  L-Cysteine
C00101  Tetrahydrofolate
C00123  L-Leucine
C00135  L-Histidine
C00148  L-Proline
C00152  L-Asparagine
C00183  L-Valine
C00188  L-Threonine
C00234  10-Formyltetrahydrofolate
C00407  L-Isoleucine
C00886  L-Alanyl-tRNA
C01005  O-Phospho-L-serine
C01931  L-Lysyl-tRNA
C02047  L-Leucyl-tRNA
C02163  L-Arginyl-tRNA(Arg)
C02282  Glutaminyl-tRNA
C02412  Glycyl-tRNA(Gly)
C02430  L-Methionyl-tRNA
C02553  L-Seryl-tRNA(Ser)
C02554  L-Valyl-tRNA(Val)
C02702  L-Prolyl-tRNA(Pro)
C02839  L-Tyrosyl-tRNA(Tyr)
C02984  L-Aspartyl-tRNA(Asp)
C02987  L-Glutamyl-tRNA(Glu)
C02988  L-Histidyl-tRNA(His)
C02992  L-Threonyl-tRNA(Thr)
C03125  L-Cysteinyl-tRNA(Cys)
C03127  L-Isoleucyl-tRNA(Ile)
C03294  N-Formylmethionyl-tRNA
C03402  L-Asparaginyl-tRNA(Asn)
C03511  L-Phenylalanyl-tRNA(Phe)
C03512  L-Tryptophanyl-tRNA(Trp)
C06112  L-Glutamyl-tRNA(Gln)
C06113  L-Aspartyl-tRNA(Asn)
C06481  L-Seryl-tRNA(Sec)
C06482  L-Selenocysteinyl-tRNA(Sec)
C16138  L-Pyrrolysine
C16638  O-Phosphoseryl-tRNA(Sec)
C17022  O-Phosphoseryl-tRNA(Cys)
C17027  L-Pyrrolysyl-tRNA(Pyl)
Reference
PMID:18252769
  Authors
Sheppard K, Yuan J, Hohn MJ, Jester B, Devine KM, Soll D
  Title
From one amino acid to another: tRNA-dependent amino acid biosynthesis.
  Journal
Nucleic Acids Res 36:1813-25 (2008)
DOI:10.1093/nar/gkn015
Reference
PMID:15314242
  Authors
Polycarpo C, Ambrogelly A, Berube A, Winbush SM, McCloskey JA, Crain PF, Wood JL, Soll D
  Title
An aminoacyl-tRNA synthetase that specifically activates pyrrolysine.
  Journal
Proc Natl Acad Sci U S A 101:12450-4 (2004)
DOI:10.1073/pnas.0405362101
Related
pathway
rama00250  Alanine, aspartate and glutamate metabolism
rama00260  Glycine, serine and threonine metabolism
rama00270  Cysteine and methionine metabolism
rama00290  Valine, leucine and isoleucine biosynthesis
rama00300  Lysine biosynthesis
rama00330  Arginine and proline metabolism
rama00340  Histidine metabolism
rama00380  Tryptophan metabolism
rama00400  Phenylalanine, tyrosine and tryptophan biosynthesis
KO pathway
ko00970   

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