KEGG   PATHWAY: rec00630
Entry
rec00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Rhizobium etli CIAT 652
Class
Metabolism; Carbohydrate metabolism
Pathway map
rec00630  Glyoxylate and dicarboxylate metabolism
rec00630

Module
rec_M00012  Glyoxylate cycle [PATH:rec00630]
rec_M00621  Glycine cleavage system [PATH:rec00630]
rec_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:rec00630]
Other DBs
GO: 0046487 0043648
Organism
Rhizobium etli CIAT 652 [GN:rec]
Gene
RHECIAT_CH0000795  aceA; isocitrate lyase protein [KO:K01637] [EC:4.1.3.1]
RHECIAT_CH0004404  acsA3; acetyl-CoA synthetase protein [KO:K01895] [EC:6.2.1.1]
RHECIAT_CH0004042  acsA2; acetyl-CoA synthetase protein [KO:K01895] [EC:6.2.1.1]
RHECIAT_CH0000055  glcB; malate synthase protein [KO:K01638] [EC:2.3.3.9]
RHECIAT_CH0004174  mdh; malate dehydrogenase protein [KO:K00024] [EC:1.1.1.37]
RHECIAT_CH0002269  gltA2; citrate synthase protein [KO:K01647] [EC:2.3.3.1]
RHECIAT_CH0002270  citA; citrate synthase I protein [KO:K01647] [EC:2.3.3.1]
RHECIAT_CH0002023  gltA1; citrate synthase protein [KO:K01647] [EC:2.3.3.1]
RHECIAT_CH0004227  acnA; aconitate hydratase protein [KO:K01681] [EC:4.2.1.3]
RHECIAT_CH0004306  phbAch; acetyl-CoA acetyltransferase protein [KO:K00626] [EC:2.3.1.9]
RHECIAT_CH0000631  fadA; acetyl-CoA C-acyltransferase protein (3-ketoacyl-CoA thiolase) [KO:K00626] [EC:2.3.1.9]
RHECIAT_PC0000019  phbAc; acetyl-CoA acetyltransferase protein [KO:K00626] [EC:2.3.1.9]
RHECIAT_CH0004307  phbB; acetoacetyl-CoA reductase protein [KO:K00023] [EC:1.1.1.36]
RHECIAT_CH0001693  putative lactoylglutathione lyase protein [KO:K05606] [EC:5.1.99.1]
RHECIAT_CH0002336  pccA; propionyl-CoA carboxylase protein, alpha subunit [KO:K01965] [EC:6.4.1.3]
RHECIAT_CH0002341  pccB; propionyl-CoA carboxylase protein, beta subunit [KO:K01966] [EC:6.4.1.3 2.1.3.15]
RHECIAT_CH0003763  probable biotin carboxylase protein [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
RHECIAT_PC0000163  bhbA; methylmalonyl-CoA mutase protein [KO:K01847] [EC:5.4.99.2]
RHECIAT_CH0000893  glcD; glycolate oxidase protein, subunit D [KO:K00104] [EC:1.1.99.14]
RHECIAT_CH0000894  glcE; glycolate oxidase protein, subunit E [KO:K11472] [EC:1.1.99.14]
RHECIAT_CH0000895  glcF; glycolate oxidase protein, subunit F [KO:K11473] [EC:1.1.99.14]
RHECIAT_CH0000175  probable D-2-hydroxyacid dehydrogenase protein [KO:K00015] [EC:1.1.1.26]
RHECIAT_PC0000540  putative D-2-hydroxyacid dehydrogenase protein [KO:K12972] [EC:1.1.1.79 1.1.1.81]
RHECIAT_CH0000223  putative 2-hydroxyacid dehydrogenase protein [KO:K12972] [EC:1.1.1.79 1.1.1.81]
RHECIAT_CH0002344  gph1; phosphoglycolate phosphatase protein [KO:K01091] [EC:3.1.3.18]
RHECIAT_CH0002472  gph2; phosphoglycolate phosphatase protein [KO:K01091] [EC:3.1.3.18]
RHECIAT_CH0000933  probable phosphoglycolate phosphatase protein [KO:K01091] [EC:3.1.3.18]
RHECIAT_CH0000787  glnA1; glutamine synthetase protein [KO:K01915] [EC:6.3.1.2]
RHECIAT_CH0001412  probable glutamine synthetase protein [KO:K01915] [EC:6.3.1.2]
RHECIAT_CH0002153  glnA2; glutamine synthetase protein [KO:K01915] [EC:6.3.1.2]
RHECIAT_CH0003038  glnA3; glutamine synthetase protein [KO:K01915] [EC:6.3.1.2]
RHECIAT_CH0003263  glnII; glutamine synthetase II protein [KO:K01915] [EC:6.3.1.2]
RHECIAT_CH0001578  glyA1; serine hydroxymethyltransferase protein [KO:K00600] [EC:2.1.2.1]
RHECIAT_CH0002060  glyA2; serine hydroxymethyltransferase protein [KO:K00600] [EC:2.1.2.1]
RHECIAT_CH0002352  gcvP; glycine dehydrogenase (decarboxylating) protein [KO:K00281] [EC:1.4.4.2]
RHECIAT_CH0002350  gcvT; aminomethyltransferase protein [KO:K00605] [EC:2.1.2.10]
RHECIAT_CH0004164  lpdA2; dihydrolipoamide dehydrogenase protein [KO:K00382] [EC:1.8.1.4]
RHECIAT_CH0002035  lpdA1; dihydrolipoamide dehydrogenase protein [KO:K00382] [EC:1.8.1.4]
RHECIAT_CH0002351  gcvH; glycine cleavage system H protein [KO:K02437]
RHECIAT_PC0000702  putative xylose isomerase domain protein [KO:K01816] [EC:5.3.1.22]
RHECIAT_CH0003611  putative hydroxypyruvate isomerase protein [KO:K01816] [EC:5.3.1.22]
RHECIAT_CH0002531  probable 3-hydroxyisobutyrate dehydrogenase protein [KO:K00042] [EC:1.1.1.60]
RHECIAT_CH0001882  ttuD; hydroxypyruvate reductase protein [KO:K11529] [EC:2.7.1.165]
RHECIAT_PC0000543  probable tartrate dehydrogenase protein [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
RHECIAT_CH0003906  eda; 2-dehydro-3-deoxyphosphogluconate aldolase protein [KO:K01625] [EC:4.1.2.14 4.1.3.42]
RHECIAT_CH0004136  fdsD; formate dehydrogenase protein, delta subunit [KO:K00126] [EC:1.17.1.9]
RHECIAT_CH0004138  fdsA; formate dehydrogenase protein, alpha subunit [KO:K00123] [EC:1.17.1.9]
RHECIAT_CH0004139  fdsB; formate dehydrogenase protein, beta subunit [KO:K00124]
RHECIAT_CH0004140  fdsG; formate dehydrogenase protein, gamma subunit [KO:K00127]
RHECIAT_PA0000333  purUa; formyltetrahydrofolate deformylase protein [KO:K01433] [EC:3.5.1.10]
RHECIAT_CH0000268  purUch1; formyltetrahydrofolate deformylase protein [KO:K01433] [EC:3.5.1.10]
RHECIAT_CH0002062  purUch2; formyltetrahydrofolate deformylase protein [KO:K01433] [EC:3.5.1.10]
RHECIAT_PA0000077  hutG; formiminoglutamase protein [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
rec00010  Glycolysis / Gluconeogenesis
rec00020  Citrate cycle (TCA cycle)
rec00030  Pentose phosphate pathway
rec00053  Ascorbate and aldarate metabolism
rec00071  Fatty acid degradation
rec00230  Purine metabolism
rec00250  Alanine, aspartate and glutamate metabolism
rec00260  Glycine, serine and threonine metabolism
rec00620  Pyruvate metabolism
rec00750  Vitamin B6 metabolism
rec00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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