KEGG   PATHWAY: ron00040
Entry
ron00040                    Pathway                                
Name
Pentose and glucuronate interconversions - Raoultella ornithinolytica S12
Class
Metabolism; Carbohydrate metabolism
Pathway map
ron00040  Pentose and glucuronate interconversions
ron00040

Module
ron_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:ron00040]
ron_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:ron00040]
Organism
Raoultella ornithinolytica S12 [GN:ron]
Gene
TE10_09680  acyl-CoA thioesterase [KO:K01051] [EC:3.1.1.11]
TE10_02310  pectate lyase [KO:K22994] [EC:4.2.2.9]
TE10_23030  oligogalacturonate lyase [KO:K01730] [EC:4.2.2.6]
TE10_22975  cupin [KO:K26933] [EC:4.2.99.25]
TE10_12325  2-deoxy-D-gluconate 3-dehydrogenase [KO:K00065] [EC:1.1.1.127]
TE10_23025  2-deoxy-D-gluconate 3-dehydrogenase [KO:K00065] [EC:1.1.1.127]
TE10_07295  exo-poly-alpha-D-galacturonosidase [KO:K01184] [EC:3.2.1.15]
TE10_24585  glucuronate isomerase [KO:K01812] [EC:5.3.1.12]
TE10_15625  glucuronate isomerase [KO:K01812] [EC:5.3.1.12]
TE10_15025  altronate oxidoreductase [KO:K00041] [EC:1.1.1.58]
TE10_24580  altronate hydrolase [KO:K01685] [EC:4.2.1.7]
TE10_19875  mannonate dehydratase [KO:K01686] [EC:4.2.1.8]
TE10_15640  bifunctional D-altronate/D-mannonate dehydratase [KO:K08323] [EC:4.2.1.8]
TE10_21375  2-dehydro-3-deoxy-6-phosphogalactonate aldolase [KO:K08323] [EC:4.2.1.8]
TE10_15615  D-mannonate oxidoreductase [KO:K00040] [EC:1.1.1.57]
TE10_15635  oxidoreductase [KO:K08322] [EC:1.1.1.380]
TE10_19240  UDP-glucose 6-dehydrogenase [KO:K00012] [EC:1.1.1.22]
TE10_19310  UTP--glucose-1-phosphate uridylyltransferase [KO:K00963] [EC:2.7.7.9]
TE10_17490  UTP--glucose-1-phosphate uridylyltransferase [KO:K00963] [EC:2.7.7.9]
TE10_01345  2,3-diketo-L-gulonate reductase [KO:K08092] [EC:1.1.1.130]
TE10_01365  xylulose kinase [KO:K00880] [EC:2.7.1.53]
TE10_01370  sgbH; 3-keto-L-gulonate-6-phosphate decarboxylase [KO:K03078] [EC:4.1.1.85]
TE10_01375  xylulose 5-phosphate 3-epimerase [KO:K03079] [EC:5.1.3.22]
TE10_01380  araD; ribulose 5-phosphate epimerase [KO:K03077] [EC:5.1.3.4]
TE10_06080  araD; ribulose 5-phosphate epimerase [KO:K03077] [EC:5.1.3.4]
TE10_00385  ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
TE10_25155  sugar isomerase [KO:K01804] [EC:5.3.1.4]
TE10_25160  arabinose isomerase [KO:K01804] [EC:5.3.1.4]
TE10_06085  sugar isomerase [KO:K01804] [EC:5.3.1.4]
TE10_06090  ribulokinase [KO:K00853] [EC:2.7.1.16]
TE10_01270  xylulose kinase [KO:K00854] [EC:2.7.1.17]
TE10_19455  xylulose kinase [KO:K00854] [EC:2.7.1.17]
TE10_01275  xylose isomerase [KO:K01805] [EC:5.3.1.5]
TE10_02710  rhamnulokinase [KO:K00848] [EC:2.7.1.5]
TE10_02700  rhamnulose-1-phosphate aldolase [KO:K01629] [EC:4.1.2.19]
TE10_19460  D-arabinitol 4-dehydrogenase [KO:K00007] [EC:1.1.1.11]
TE10_25145  sorbitol dehydrogenase [KO:K00008] [EC:1.1.1.14]
TE10_04885  dehydratase [KO:K22396] [EC:4.2.1.82]
TE10_04880  2-keto-3-deoxy-galactonate aldolase [KO:K22397] [EC:4.1.2.28]
TE10_19480  ribulokinase [KO:K00875] [EC:2.7.1.47]
TE10_19475  glucose dehydrogenase [KO:K00039] [EC:1.1.1.56]
TE10_22730  fucI; sugar isomerase [KO:K01818] [EC:5.3.1.25 5.3.1.3]
TE10_22735  L-fuculose kinase [KO:K00879] [EC:2.7.1.51]
TE10_22720  fuculose phosphate aldolase [KO:K01628] [EC:4.1.2.17]
Compound
C00022  Pyruvate
C00026  2-Oxoglutarate
C00029  UDP-glucose
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00116  Glycerol
C00167  UDP-glucuronate
C00181  D-Xylose
C00191  D-Glucuronate
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00216  D-Arabinose
C00231  D-Xylulose 5-phosphate
C00259  L-Arabinose
C00266  Glycolaldehyde
C00309  D-Ribulose
C00310  D-Xylulose
C00312  L-Xylulose
C00333  D-Galacturonate
C00379  Xylitol
C00433  2,5-Dioxopentanoate
C00470  Pectate
C00474  Ribitol
C00476  D-Lyxose
C00502  D-Xylonate
C00508  L-Ribulose
C00514  D-Mannonate
C00532  L-Arabitol
C00558  D-Tagaturonate
C00618  3-Dehydro-L-gulonate
C00714  Pectin
C00789  CDP-ribitol
C00800  L-Gulonate
C00817  D-Altronate
C00905  D-Fructuronate
C01068  D-Ribitol 5-phosphate
C01101  L-Ribulose 5-phosphate
C01508  L-Lyxose
C01904  D-Arabitol
C02266  D-Xylonolactone
C02273  Digalacturonate
C02426  L-Glyceraldehyde
C02753  D-Xylono-1,4-lactone
C03033  beta-D-Glucuronoside
C03291  L-Xylulose 5-phosphate
C03826  2-Dehydro-3-deoxy-D-xylonate
C04053  5-Dehydro-4-deoxy-D-glucuronate
C04349  (4S)-4,6-Dihydroxy-2,5-dioxohexanoate
C04575  (4R,5S)-4,5,6-Trihydroxy-2,3-dioxohexanoate
C05385  D-Glucuronate 1-phosphate
C05411  L-Xylonate
C05412  L-Lyxonate
C06118  4-(4-Deoxy-alpha-D-gluc-4-enuronosyl)-D-galacturonate
C06441  L-Xylulose 1-phosphate
C14899  3-Dehydro-L-gulonate 6-phosphate
C15930  L-Galactonate
C20680  2-Dehydro-3-deoxy-L-galactonate
C22337  D-Ribulose 1-phosphate
C22712  4-Deoxy-L-threo-hex-4-enopyranuronate
Reference
PMID:11741871
  Authors
Yew WS, Gerlt JA.
  Title
Utilization of L-ascorbate by Escherichia coli K-12: assignments of functions to products of the yjf-sga and yia-sgb operons.
  Journal
J Bacteriol 184:302-6 (2002)
DOI:10.1128/JB.184.1.302-306.2002
Reference
PMID:15697206
  Authors
Yew WS, Akana J, Wise EL, Rayment I, Gerlt JA
  Title
Evolution of enzymatic activities in the orotidine 5'-monophosphate decarboxylase suprafamily: enhancing the promiscuous D-arabino-hex-3-ulose 6-phosphate synthase reaction catalyzed by 3-keto-L-gulonate 6-phosphate decarboxylase.
  Journal
Biochemistry 44:1807-15 (2005)
DOI:10.1021/bi047815v
Reference
PMID:10572115
  Authors
Yasueda H, Kawahara Y, Sugimoto S.
  Title
Bacillus subtilis yckG and yckF encode two key enzymes of the ribulose monophosphate pathway used by methylotrophs, and yckH is required for their expression.
  Journal
J Bacteriol 181:7154-60 (1999)
DOI:10.1128/JB.181.23.7154-7160.1999
Reference
PMID:10913097
  Authors
Ibanez E, Gimenez R, Pedraza T, Baldoma L, Aguilar J, Badia J
  Title
Role of the yiaR and yiaS genes of Escherichia coli in metabolism of endogenously formed L-xylulose.
  Journal
J Bacteriol 182:4625-7 (2000)
DOI:10.1128/JB.182.16.4625-4627.2000
Reference
PMID:15901685
  Authors
Orita I, Yurimoto H, Hirai R, Kawarabayasi Y, Sakai Y, Kato N
  Title
The archaeon Pyrococcus horikoshii possesses a bifunctional enzyme for formaldehyde fixation via the ribulose monophosphate pathway.
  Journal
J Bacteriol 187:3636-42 (2005)
DOI:10.1128/JB.187.11.3636-3642.2005
Related
pathway
ron00010  Glycolysis / Gluconeogenesis
ron00020  Citrate cycle (TCA cycle)
ron00030  Pentose phosphate pathway
ron00052  Galactose metabolism
ron00053  Ascorbate and aldarate metabolism
ron00500  Starch and sucrose metabolism
ron00520  Amino sugar and nucleotide sugar metabolism
ron00561  Glycerolipid metabolism
ron00562  Inositol phosphate metabolism
ron00740  Riboflavin metabolism
KO pathway
ko00040   
LinkDB

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