KEGG   PATHWAY: sek00030
Entry
sek00030                    Pathway                                
Name
Pentose phosphate pathway - Salmonella enterica subsp. enterica serovar Paratyphi A AKU12601
Description
The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].
Class
Metabolism; Carbohydrate metabolism
Pathway map
sek00030  Pentose phosphate pathway
sek00030

Module
sek_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:sek00030]
sek_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:sek00030]
sek_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:sek00030]
sek_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:sek00030]
sek_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:sek00030]
sek_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:sek00030]
Other DBs
GO: 0006098
Organism
Salmonella enterica subsp. enterica serovar Paratyphi A AKU12601 [GN:sek]
Gene
SSPA3747  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
SSPA0917  glucose 6-phosphate dehydrogenase [KO:K00036] [EC:1.1.1.49 1.1.1.363]
SSPA1834  conserved hypothetical protein [KO:K07404] [EC:3.1.1.31]
SSPA0740  6-phosphogluconate dehydrogenase,decarboxylating [KO:K00033] [EC:1.1.1.44 1.1.1.343]
SSPA3651  putative ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
SSPA3124  ribulose-phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
SSPA0369  transketolase 2 [KO:K00615] [EC:2.2.1.1]
SSPA0487  putative transketolase N-terminal section [KO:K00615] [EC:2.2.1.1]
SSPA0488  putative transketolase C-terminal section [KO:K00615] [EC:2.2.1.1]
SSPA2746  transketolase [KO:K00615] [EC:2.2.1.1]
SSPA0370  transaldolase A [KO:K00616] [EC:2.2.1.2]
SSPA0006  transaldolase B [KO:K00616] [EC:2.2.1.2]
SSPA2733  ribose 5-phosphate isomerase [KO:K01807] [EC:5.3.1.6]
SSPA4066  deoxyribose-phosphate aldolase [KO:K01619] [EC:4.1.2.4]
SSPA3478  ribokinase [KO:K00852] [EC:2.7.1.15]
SSPA3401  putative carbohydrate kinase [KO:K00852] [EC:2.7.1.15]
SSPA4068  phosphopentomutase [KO:K01839] [EC:5.4.2.7]
SSPA1904  phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
SSPA1020  ribose-phosphate pyrophosphokinase [KO:K00948] [EC:2.7.6.1]
SSPA0918  6-phosphogluconate dehydratase [KO:K01690] [EC:4.2.1.12]
SSPA0919  hypothetical protein [KO:K01625] [EC:4.1.2.14 4.1.3.42]
SSPA3379  conserved hypothetical protein [KO:K17463] [EC:4.1.2.14]
SSPA0168  glucose dehydrogenase [KO:K00117] [EC:1.1.5.2]
SSPA3265  putative 2-hydroxyacid dehydrogenase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
SSPA3982  D-gluconate kinase, thermosensitive [KO:K00851] [EC:2.7.1.12]
SSPA3168  putative gluconokinase [KO:K00851] [EC:2.7.1.12]
SSPA3238  2-dehydro-3-deoxygluconokinase [KO:K00874] [EC:2.7.1.45]
SSPA3384  putative PTS system protein [KO:K17464] [EC:2.7.1.203]
SSPA3383  putative PTS system protein [KO:K17465] [EC:2.7.1.203]
SSPA3382  putative PTS system protein [KO:K17466]
SSPA3381  putative PTS system protein [KO:K17467]
SSPA3380  putative transferase [KO:K17468] [EC:4.3.1.29]
SSPA0670  fructose-bisphosphate aldolase class I [KO:K11645] [EC:4.1.2.13]
SSPA2738  fructose 1,6-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
SSPA3934  fructose-1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
SSPA3655  putative glycerol metabolic protein [KO:K02446] [EC:3.1.3.11]
SSPA3633  6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
SSPA1409  6-phosphofructokinase isozyme [KO:K16370] [EC:2.7.1.11]
Compound
C00022  Pyruvate
C00031  D-Glucose
C00085  D-Fructose 6-phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00121  D-Ribose
C00197  3-Phospho-D-glycerate
C00198  D-Glucono-1,5-lactone
C00199  D-Ribulose 5-phosphate
C00204  2-Dehydro-3-deoxy-D-gluconate
C00221  beta-D-Glucose
C00231  D-Xylulose 5-phosphate
C00257  D-Gluconic acid
C00258  D-Glycerate
C00279  D-Erythrose 4-phosphate
C00345  6-Phospho-D-gluconate
C00354  D-Fructose 1,6-bisphosphate
C00577  D-Glyceraldehyde
C00620  alpha-D-Ribose 1-phosphate
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C00672  2-Deoxy-D-ribose 1-phosphate
C00673  2-Deoxy-D-ribose 5-phosphate
C01151  D-Ribose 1,5-bisphosphate
C01172  beta-D-Glucose 6-phosphate
C01182  D-Ribulose 1,5-bisphosphate
C01218  6-Phospho-2-dehydro-D-gluconate
C01236  D-Glucono-1,5-lactone 6-phosphate
C01801  Deoxyribose
C02076  Sedoheptulose
C03752  2-Amino-2-deoxy-D-gluconate
C04442  2-Dehydro-3-deoxy-6-phospho-D-gluconate
C05382  Sedoheptulose 7-phosphate
C06019  D-arabino-Hex-3-ulose 6-phosphate
C06473  2-Keto-D-gluconic acid
C20589  D-Glucosaminate-6-phosphate
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Reference
  Authors
Hove-Jensen B, Rosenkrantz TJ, Haldimann A, Wanner BL.
  Title
Escherichia coli phnN, encoding ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming): dual role in phosphonate degradation and NAD biosynthesis pathways.
  Journal
J Bacteriol 185:2793-801 (2003)
DOI:10.1128/JB.185.9.2793-2801.2003
Reference
  Authors
Orita I, Sato T, Yurimoto H, Kato N, Atomi H, Imanaka T, Sakai Y
  Title
The ribulose monophosphate pathway substitutes for the missing pentose phosphate pathway in the archaeon Thermococcus kodakaraensis.
  Journal
J Bacteriol 188:4698-704 (2006)
DOI:10.1128/JB.00492-06
Reference
  Authors
Kato N, Yurimoto H, Thauer RK
  Title
The physiological role of the ribulose monophosphate pathway in bacteria and archaea.
  Journal
Biosci Biotechnol Biochem 70:10-21 (2006)
DOI:10.1271/bbb.70.10
Reference
  Authors
Kouril T, Wieloch P, Reimann J, Wagner M, Zaparty M, Albers SV, Schomburg D, Ruoff P, Siebers B
  Title
Unraveling the function of the two Entner-Doudoroff branches in the thermoacidophilic Crenarchaeon Sulfolobus solfataricus P2.
  Journal
FEBS J 280:1126-38 (2013)
DOI:10.1111/febs.12106
Reference
  Authors
Reher M, Schonheit P
  Title
Glyceraldehyde dehydrogenases from the thermoacidophilic euryarchaeota Picrophilus torridus and Thermoplasma acidophilum, key enzymes of the non-phosphorylative Entner-Doudoroff pathway, constitute a novel enzyme family within the aldehyde dehydrogenase superfamily.
  Journal
FEBS Lett 580:1198-204 (2006)
DOI:10.1016/j.febslet.2006.01.029
Reference
  Authors
Reher M, Fuhrer T, Bott M, Schonheit P
  Title
The nonphosphorylative Entner-Doudoroff pathway in the thermoacidophilic euryarchaeon Picrophilus torridus involves a novel 2-keto-3-deoxygluconate- specific aldolase.
  Journal
J Bacteriol 192:964-74 (2010)
DOI:10.1128/JB.01281-09
Related
pathway
sek00010  Glycolysis / Gluconeogenesis
sek00040  Pentose and glucuronate interconversions
sek00052  Galactose metabolism
sek00230  Purine metabolism
sek00240  Pyrimidine metabolism
sek00340  Histidine metabolism
sek00630  Glyoxylate and dicarboxylate metabolism
sek00750  Vitamin B6 metabolism
KO pathway
ko00030   
LinkDB

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