KEGG   PATHWAY: sfh00010
Entry
sfh00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Sinorhizobium fredii HH103
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
sfh00010  Glycolysis / Gluconeogenesis
sfh00010

Module
sfh_M00002  Glycolysis, core module involving three-carbon compounds [PATH:sfh00010]
sfh_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:sfh00010]
sfh_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:sfh00010]
Other DBs
GO: 0006096 0006094
Organism
Sinorhizobium fredii HH103 [GN:sfh]
Gene
SFHH103_03658  glk; glucokinase (glucose kinase) protein, Glk [KO:K00845] [EC:2.7.1.2]
SFHH103_00112  pgi; pgi [KO:K01810] [EC:5.3.1.9]
SFHH103_02019  pfk; pyrophosphate-fructose-6-phosphate1-phosphotransferase [KO:K00895] [EC:2.7.1.90]
SFHH103_05879  cbbF; Putative fructose-1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
SFHH103_02822  fbaB; fructose-bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
SFHH103_05882  cbbA; Putative fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
SFHH103_05672  fda; fructose-1,6-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
SFHH103_01161  tpiA; tpiA [KO:K01803] [EC:5.3.1.1]
SFHH103_02819  putative glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
SFHH103_02821  pgk; phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
SFHH103_03661  gpm; Phosphoglycerate mutase 1 family protein [KO:K01834] [EC:5.4.2.11]
SFHH103_01166  eno; eno [KO:K01689] [EC:4.2.1.11]
SFHH103_02846  putative pyruvate kinase [KO:K00873] [EC:2.7.1.40]
SFHH103_00618  ppdK; pyruvate phosphate dikinase [KO:K01006] [EC:2.7.9.1]
SFHH103_01168  pdhA; pyruvate dehydrogenase E1 component, alpha subunit [KO:K00161] [EC:1.2.4.1]
SFHH103_01169  pdhB; pyruvate dehydrogenase E1 component, beta subunit [KO:K00162] [EC:1.2.4.1]
SFHH103_01170  dihydrolipoyllysine-residue acetyltransferase component of pyruvatedehydrogenase complex [KO:K00627] [EC:2.3.1.12]
SFHH103_01173  lpda1; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
SFHH103_03001  lpdA2; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
SFHH103_03154  lpda3; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
SFHH103_01113  adhc1; glutathione-dependent formaldehyde dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
SFHH103_04903  adhI1; alcohol dehydrogenase class III [KO:K00121] [EC:1.1.1.284 1.1.1.1]
SFHH103_04878  adhC4; alcohol dehydrogenase class III [KO:K00121] [EC:1.1.1.284 1.1.1.1]
SFHH103_05907  Putative formaldehyde dehydrogenase (glutathione)/alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
SFHH103_00629  adha3; alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
SFHH103_00447  adha1; alcohol dehydrogenase, zinc-containing [KO:K13953] [EC:1.1.1.1]
SFHH103_00664  adh1; alcohol dehydrogenase [KO:K00001] [EC:1.1.1.1]
SFHH103_02659  adhc3; NADP-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
SFHH103_06439  exaA; quinoprotein ethanol dehydrogenase [KO:K00114] [EC:1.1.2.8]
SFHH103_06186  putative aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
SFHH103_02402  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
SFHH103_05767  Putative aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
SFHH103_06568  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
SFHH103_02183  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
SFHH103_02603  acsa3; putative AMP-binding protein; AcsA-like [KO:K01895] [EC:6.2.1.1]
SFHH103_03481  acsa5; acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
SFHH103_03193  galM; aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
SFHH103_02905  putative phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
SFHH103_05652  manB; phosphomannomutase/phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
SFHH103_03543  pckA; ATP dependant phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
sfh00020  Citrate cycle (TCA cycle)
sfh00030  Pentose phosphate pathway
sfh00500  Starch and sucrose metabolism
sfh00620  Pyruvate metabolism
sfh00640  Propanoate metabolism
sfh00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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