KEGG   PATHWAY: sfh00240
Entry
sfh00240                    Pathway                                
Name
Pyrimidine metabolism - Sinorhizobium fredii HH103
Class
Metabolism; Nucleotide metabolism
Pathway map
sfh00240  Pyrimidine metabolism
sfh00240

Module
sfh_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:sfh00240]
sfh_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:sfh00240]
sfh_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:sfh00240]
sfh_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:sfh00240]
Other DBs
GO: 0006220 0006213
Organism
Sinorhizobium fredii HH103 [GN:sfh]
Gene
SFHH103_00109  pyrc1; dihydroorotase, homodimeric type [KO:K01465] [EC:3.5.2.3]
SFHH103_00110  pyrE; pyrE [KO:K00762] [EC:2.4.2.10]
SFHH103_00178  dcd; 2'-deoxycytidine 5'-triphosphate deaminase [KO:K01494] [EC:3.5.4.13]
SFHH103_00203  pyrD; dihydroorotate dehydrogenase 2 [KO:K00254] [EC:1.3.5.2]
SFHH103_00266  maf; Maf-like protein [KO:K06287] [EC:3.6.1.-]
SFHH103_00785  [KO:K06952] [EC:3.1.3.89]
SFHH103_00842  ndk; ndk [KO:K00940] [EC:2.7.4.6]
SFHH103_01025  pyrc3; probable dihydroorotase [KO:K01465] [EC:3.5.2.3]
SFHH103_01026  pyrB; probable aspartate carbamoyltransferase [KO:K00609] [EC:2.1.3.2]
SFHH103_01163  pyrG; CTP synthase [KO:K01937] [EC:6.3.4.2]
SFHH103_01189  mazG; Protein mazG homolog [KO:K04765] [EC:3.6.1.9]
SFHH103_01220  pyrH; pyrH [KO:K09903] [EC:2.7.4.22]
SFHH103_01255  surE; stationary phase survival protein SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
SFHH103_01382  cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
SFHH103_01449  nrdJ; ribonucleoside-diphosphate reductase alpha chain [KO:K00525] [EC:1.17.4.1]
SFHH103_01466  carB; carbamoyl-phosphate synthase large chain [KO:K01955] [EC:6.3.5.5]
SFHH103_01494  tmk; thymidylate kinase [KO:K00943] [EC:2.7.4.9]
SFHH103_01536  [KO:K16329] [EC:4.2.1.70]
SFHH103_01779  amaB; amidase, hydantoinase/carbamoylase [KO:K06016] [EC:3.5.1.6 3.5.1.87]
SFHH103_01965  thyA; thyA [KO:K00560] [EC:2.1.1.45]
SFHH103_02133  carA; carbamoyl-phosphate synthase small chain [KO:K01956] [EC:6.3.5.5]
SFHH103_02234  tdk; tdk [KO:K00857] [EC:2.7.1.21]
SFHH103_02341  [KO:K17722] [EC:1.3.1.1]
SFHH103_02342  [KO:K17723] [EC:1.3.1.1]
SFHH103_02347  [KO:K06016] [EC:3.5.1.6 3.5.1.87]
SFHH103_02348  dht; dihydropyrimidinase [KO:K01464] [EC:3.5.2.2]
SFHH103_02812  [KO:K09769] [EC:3.1.4.16]
SFHH103_02859  [KO:K11751] [EC:3.1.3.5 3.6.1.45]
SFHH103_03500  [KO:K06287] [EC:3.6.1.-]
SFHH103_03626  [KO:K01489] [EC:3.5.4.5]
SFHH103_03628  deoA; deoA [KO:K00758] [EC:2.4.2.4]
SFHH103_03630  upp; upp [KO:K00761] [EC:2.4.2.9]
SFHH103_03821  cmk; cmk [KO:K00945] [EC:2.7.4.25]
SFHH103_03903  pyrF; orotidine 5`-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
SFHH103_03943  dut; deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
SFHH103_05221  hpaC; 4-hydroxyphenylacetate 3-monooxygenase, reductase component [KO:K09024] [EC:1.5.1.-]
SFHH103_05504  codA; cytosine deaminase [KO:K01485] [EC:3.5.4.1 3.5.4.21]
SFHH103_05959  [KO:K01955] [EC:6.3.5.5]
SFHH103_06724  nrdF; ribonucleoside-diphosphate reductase beta chain [KO:K00526] [EC:1.17.4.1]
SFHH103_06725  nrdE; ribonucleoside-diphosphate reductase alpha chain [KO:K00525] [EC:1.17.4.1]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
sfh00030  Pentose phosphate pathway
sfh00220  Arginine biosynthesis
sfh00250  Alanine, aspartate and glutamate metabolism
sfh00280  Valine, leucine and isoleucine degradation
sfh00410  beta-Alanine metabolism
KO pathway
ko00240   

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