KEGG   PATHWAY: sla04120
Entry
sla04120                    Pathway                                
Name
Ubiquitin mediated proteolysis - Serpula lacrymans
Description
Protein ubiquitination plays an important role in eukaryotic cellular processes. It mainly functions as a signal for 26S proteasome dependent protein degradation. The addition of ubiquitin to proteins being degraded is performed by a reaction cascade consisting of three enzymes, named E1 (ubiquitin activating enzyme), E2 (ubiquitin conjugating enzyme), and E3 (ubiquitin ligase). Each E3 has specificity to its substrate, or proteins to be targeted by ubiquitination. Many E3s are discovered in eukaryotes and they are classified into four types: HECT type, U-box type, single RING-finger type, and multi-subunit RING-finger type. Multi-subunit RING-finger E3s are exemplified by cullin-Rbx E3s and APC/C. They consist of a RING-finger-containing subunit (RBX1 or RBX2) that functions to bind E2s, a scaffold-like cullin molecule, adaptor proteins, and a target recognizing subunit that binds substrates.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
sla04120  Ubiquitin mediated proteolysis
sla04120

Other DBs
GO: 0016567
Organism
Serpula lacrymans [GN:sla]
Gene
SERLADRAFT_402972  hypothetical protein [KO:K02927]
SERLADRAFT_360126  hypothetical protein [KO:K03178] [EC:6.2.1.45]
SERLADRAFT_470642  hypothetical protein [KO:K10684] [EC:6.2.1.45]
SERLADRAFT_416361  hypothetical protein [KO:K10685] [EC:6.2.1.45]
SERLADRAFT_481008  hypothetical protein [KO:K10686] [EC:6.2.1.64]
SERLADRAFT_474416  hypothetical protein [KO:K06688] [EC:2.3.2.23]
SERLADRAFT_379210  hypothetical protein [KO:K06689] [EC:2.3.2.23]
SERLADRAFT_459079  hypothetical protein [KO:K10575] [EC:2.3.2.23]
SERLADRAFT_380332  hypothetical protein [KO:K04555] [EC:2.3.2.23]
SERLADRAFT_367087  hypothetical protein [KO:K10576] [EC:2.3.2.23]
SERLADRAFT_475693  ubiquitin-conjugating enzyme, E2 [KO:K10577]
SERLADRAFT_473992  hypothetical protein [KO:K10578] [EC:2.3.2.23]
SERLADRAFT_351869  hypothetical protein [KO:K04554] [EC:2.3.2.23]
SERLADRAFT_469290  hypothetical protein [KO:K04649] [EC:2.3.2.23]
SERLADRAFT_455531  hypothetical protein [KO:K10579] [EC:2.3.2.34]
SERLADRAFT_400991  hypothetical protein [KO:K10580] [EC:2.3.2.23]
SERLADRAFT_444505  hypothetical protein [KO:K10581] [EC:2.3.2.24]
SERLADRAFT_459162  hypothetical protein [KO:K10583] [EC:2.3.2.23]
SERLADRAFT_401900  hypothetical protein [KO:K10688] [EC:2.3.2.23 2.3.2.25]
SERLADRAFT_479689  hypothetical protein [KO:K10589] [EC:2.3.2.26]
SERLADRAFT_357165  hypothetical protein [KO:K10590] [EC:2.3.2.26]
SERLADRAFT_439115  hypothetical protein [KO:K10591] [EC:2.3.2.26]
SERLADRAFT_440766  hypothetical protein [KO:K10591] [EC:2.3.2.26]
SERLADRAFT_455323  hypothetical protein [KO:K10598] [EC:5.2.1.8]
SERLADRAFT_412304  hypothetical protein [KO:K04706] [EC:2.3.2.-]
SERLADRAFT_385744  hypothetical protein [KO:K03868] [EC:2.3.2.32]
SERLADRAFT_398215  hypothetical protein [KO:K03094]
SERLADRAFT_357303  hypothetical protein [KO:K03361]
SERLADRAFT_363292  hypothetical protein [KO:K03361]
SERLADRAFT_440992  hypothetical protein [KO:K10259]
SERLADRAFT_447081  hypothetical protein [KO:K03360]
SERLADRAFT_360426  hypothetical protein [KO:K03360]
SERLADRAFT_418126  hypothetical protein [KO:K03872]
SERLADRAFT_449585  hypothetical protein [KO:K03869]
SERLADRAFT_453586  hypothetical protein [KO:K10609]
SERLADRAFT_449959  hypothetical protein [KO:K10610]
SERLADRAFT_479147  hypothetical protein [KO:K03358]
SERLADRAFT_416324  hypothetical protein [KO:K03349]
SERLADRAFT_414564  hypothetical protein [KO:K03363]
SERLADRAFT_434615  hypothetical protein [KO:K03363]
SERLADRAFT_447381  hypothetical protein [KO:K03364]
SERLADRAFT_453036  hypothetical protein [KO:K03348]
SERLADRAFT_452141  hypothetical protein [KO:K03350]
SERLADRAFT_454537  hypothetical protein [KO:K03351]
SERLADRAFT_361562  hypothetical protein [KO:K03353]
SERLADRAFT_448425  hypothetical protein [KO:K03355]
SERLADRAFT_438236  hypothetical protein [KO:K03357]
Reference
  Authors
Kamura T.
  Title
[Cullin-based E3 family]
  Journal
Tanpakushitsu Kakusan Koso 51:1167-72 (2006)
Reference
  Authors
Matsuda N.
  Title
[Overview: hereditary disorders caused by dysfunction of ubiquitylation]
  Journal
Tanpakushitsu Kakusan Koso 51:1402-7 (2006)
Reference
  Authors
Tokunaga F.
  Title
[E2 ubiquitin-conjugating enzymes: structures and functions]
  Journal
Tanpakushitsu Kakusan Koso 51:1150-6 (2006)
Reference
  Authors
Nalepa G, Rolfe M, Harper JW.
  Title
Drug discovery in the ubiquitin-proteasome system.
  Journal
Nat Rev Drug Discov 5:596-613 (2006)
DOI:10.1038/nrd2056
Reference
  Authors
Hsu YJ, Goodman SR.
  Title
Spectrin and ubiquitination: a review.
  Journal
Cell Mol Biol (Noisy-le-grand) Suppl 51:OL801-7 (2005)
Reference
  Authors
Hatakeyama S, Nakayama KI.
  Title
Ubiquitylation as a quality control system for intracellular proteins.
  Journal
J Biochem 134:1-8 (2003)
DOI:10.1093/jb/mvg106
Reference
  Authors
Lee J, Zhou P.
  Title
DCAFs, the missing link of the CUL4-DDB1 ubiquitin ligase.
  Journal
Mol Cell 26:775-80 (2007)
DOI:10.1016/j.molcel.2007.06.001
Related
pathway
sla03050  Proteasome
KO pathway
ko04120   
LinkDB

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